Gene Nmar_1591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1591 
Symbol 
ID5773811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1454981 
End bp1456726 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content36% 
IMG OID641317244 
Producthypothetical protein 
Protein accessionYP_001582925 
Protein GI161529099 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAT GGGCTGACTA TCTAATTTCT GAAGTCAGTT ATGATGCCAA CCATTTGATT 
TCTGTTGCTA TTAGACATCA GGATACCGAC AAGGGGATTA CTAAAGGAAC TCCTGTTGAC
CGACTAACTA TTTCGTCTGA CATCAAGAAC GGAATTTCTT ATATCACAAT TTACAGTGGA
AAAAACTCCT GGAAACAGGG ACATCGAATC CGAACTTTTT CAATTGATGG TGAACCATTT
TTACGAATTG ACGGAAATAA AGTAGAATTA GATTCTCTGG GTGATTTACC TGTAGTAACA
AGCATTGATC TAGATGAACT TGATTTAGCT CCAGAACCAG TTGCAGACGA ACCAATTCCA
GAACCAGCTC CTCCAAGTCC TAGAGGTTCA TTACCAAAAG AATCTGCAGA AGAACTTCCA
CAGGAACTTG ATTTAGCTCC AGAACCAGTT GCAGACGAAC CAATTCCAGA ACCAGCTCCT
CCAAGTCCTA GAGGTTCATT ACCAAAAGAA TCTGCAGAAG AACTTCCACA GGAACTTGAT
TTAGCTCCAG AACCAGTTGC AGACGAACCA ATTCCAGAAC CCGAAGAAGA GGAAGCTACT
CCTGAACAAT TAGCAAGATT AGAACAATTA GAGAAACAAA TCCAGGAGTT AGAATCTAAA
CCAGAACCAG CTCCTCCAAG TCCTAGAGGC TCATTACCAA AAGAATCTGC AGAAGAACTT
CCACAGGAAC TTGATTTAGC TCCAGAACCA GTTGCAGACG AACCAATTCC AGAACCCGAA
GAAGAGGAAG CTACTCCTGA ACAATTAGCA AGATTAGAAC AATTAGAGAA ACAAATCCAG
GAGTTAGAAT CTAAACCAGA ACCCGAAGAA GAGGAAGCTA CTCCTGAACA ATTAGCAAGA
TTAGAACAAT TAGAGAAACA AATCCAGGAG TTAGAATCTA AACCAGAACC CGAAGAAGAG
GAAGCTACTC CTGAACAATT AGCAAGATTA GAACAATTAG AGAAACAAAT CCAGGAGTTA
GAATCTAAAC CAGAACCAGC TCCTCCAAGT CCTAGAGGTT CATTACCAAA AGAATCTGCA
GAAGAACTTC CACAGGAACT TGATTTAGCT CCAGAACTAG AAGATGAAGA AGCTACTCCT
GAACAATTTG AACAATTTGA ACAATTAGAG AAACAAATCC AGGAGTTAGA ATCTAAACCA
GAACTAGAAG AGGAAGCTAC TCCTGAACAA TTTGAACAAT TAGATGAACT TCAAAAACAA
ATTGATGAAT TAGAAACTAA ATTATCTGAA AAACCTGTTC CAGAAATAAA ATCTGAGCCT
GAAGTTGAGC CTATAGTTGA GGAATATTCT GAATTTAATG ATTTAGAAGA TCAAATTGAT
GAATTAGAAA ATGAATTAAC TTCAAAACTG CATCCTTCTG ATGAAGCGAC AGAAGAACAA
ATTTCAAGAG TAAGAGAACT AGAAAAAGAA ATTGAAAAAT TAGAATCTGC TGATATTGAA
CATGAAATTA TTCAAACATT ACAAAAACAA AATAAAAAAT TAGATGAGAT TGAGAAAAAA
CTTGAACAGT CTTCAAAAAT TTCTTCAGAA ACTTCTTCCA TAGAAGCTTA CTGTGTTAAA
TGTAAAACAA AAAGAAAAAT CAAAAATCCT GAAGAAACAA TTATGAAAAA TGGTCGTCCT
GCAGTAAAGG GCACATGTTC AACATGTAAT TGTAAAGTCT TTCGTATAGG AAAAATGAAA
AAATAG
 
Protein sequence
MDKWADYLIS EVSYDANHLI SVAIRHQDTD KGITKGTPVD RLTISSDIKN GISYITIYSG 
KNSWKQGHRI RTFSIDGEPF LRIDGNKVEL DSLGDLPVVT SIDLDELDLA PEPVADEPIP
EPAPPSPRGS LPKESAEELP QELDLAPEPV ADEPIPEPAP PSPRGSLPKE SAEELPQELD
LAPEPVADEP IPEPEEEEAT PEQLARLEQL EKQIQELESK PEPAPPSPRG SLPKESAEEL
PQELDLAPEP VADEPIPEPE EEEATPEQLA RLEQLEKQIQ ELESKPEPEE EEATPEQLAR
LEQLEKQIQE LESKPEPEEE EATPEQLARL EQLEKQIQEL ESKPEPAPPS PRGSLPKESA
EELPQELDLA PELEDEEATP EQFEQFEQLE KQIQELESKP ELEEEATPEQ FEQLDELQKQ
IDELETKLSE KPVPEIKSEP EVEPIVEEYS EFNDLEDQID ELENELTSKL HPSDEATEEQ
ISRVRELEKE IEKLESADIE HEIIQTLQKQ NKKLDEIEKK LEQSSKISSE TSSIEAYCVK
CKTKRKIKNP EETIMKNGRP AVKGTCSTCN CKVFRIGKMK K