Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1591 |
Symbol | |
ID | 5773811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1454981 |
End bp | 1456726 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641317244 |
Product | hypothetical protein |
Protein accession | YP_001582925 |
Protein GI | 161529099 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAAT GGGCTGACTA TCTAATTTCT GAAGTCAGTT ATGATGCCAA CCATTTGATT TCTGTTGCTA TTAGACATCA GGATACCGAC AAGGGGATTA CTAAAGGAAC TCCTGTTGAC CGACTAACTA TTTCGTCTGA CATCAAGAAC GGAATTTCTT ATATCACAAT TTACAGTGGA AAAAACTCCT GGAAACAGGG ACATCGAATC CGAACTTTTT CAATTGATGG TGAACCATTT TTACGAATTG ACGGAAATAA AGTAGAATTA GATTCTCTGG GTGATTTACC TGTAGTAACA AGCATTGATC TAGATGAACT TGATTTAGCT CCAGAACCAG TTGCAGACGA ACCAATTCCA GAACCAGCTC CTCCAAGTCC TAGAGGTTCA TTACCAAAAG AATCTGCAGA AGAACTTCCA CAGGAACTTG ATTTAGCTCC AGAACCAGTT GCAGACGAAC CAATTCCAGA ACCAGCTCCT CCAAGTCCTA GAGGTTCATT ACCAAAAGAA TCTGCAGAAG AACTTCCACA GGAACTTGAT TTAGCTCCAG AACCAGTTGC AGACGAACCA ATTCCAGAAC CCGAAGAAGA GGAAGCTACT CCTGAACAAT TAGCAAGATT AGAACAATTA GAGAAACAAA TCCAGGAGTT AGAATCTAAA CCAGAACCAG CTCCTCCAAG TCCTAGAGGC TCATTACCAA AAGAATCTGC AGAAGAACTT CCACAGGAAC TTGATTTAGC TCCAGAACCA GTTGCAGACG AACCAATTCC AGAACCCGAA GAAGAGGAAG CTACTCCTGA ACAATTAGCA AGATTAGAAC AATTAGAGAA ACAAATCCAG GAGTTAGAAT CTAAACCAGA ACCCGAAGAA GAGGAAGCTA CTCCTGAACA ATTAGCAAGA TTAGAACAAT TAGAGAAACA AATCCAGGAG TTAGAATCTA AACCAGAACC CGAAGAAGAG GAAGCTACTC CTGAACAATT AGCAAGATTA GAACAATTAG AGAAACAAAT CCAGGAGTTA GAATCTAAAC CAGAACCAGC TCCTCCAAGT CCTAGAGGTT CATTACCAAA AGAATCTGCA GAAGAACTTC CACAGGAACT TGATTTAGCT CCAGAACTAG AAGATGAAGA AGCTACTCCT GAACAATTTG AACAATTTGA ACAATTAGAG AAACAAATCC AGGAGTTAGA ATCTAAACCA GAACTAGAAG AGGAAGCTAC TCCTGAACAA TTTGAACAAT TAGATGAACT TCAAAAACAA ATTGATGAAT TAGAAACTAA ATTATCTGAA AAACCTGTTC CAGAAATAAA ATCTGAGCCT GAAGTTGAGC CTATAGTTGA GGAATATTCT GAATTTAATG ATTTAGAAGA TCAAATTGAT GAATTAGAAA ATGAATTAAC TTCAAAACTG CATCCTTCTG ATGAAGCGAC AGAAGAACAA ATTTCAAGAG TAAGAGAACT AGAAAAAGAA ATTGAAAAAT TAGAATCTGC TGATATTGAA CATGAAATTA TTCAAACATT ACAAAAACAA AATAAAAAAT TAGATGAGAT TGAGAAAAAA CTTGAACAGT CTTCAAAAAT TTCTTCAGAA ACTTCTTCCA TAGAAGCTTA CTGTGTTAAA TGTAAAACAA AAAGAAAAAT CAAAAATCCT GAAGAAACAA TTATGAAAAA TGGTCGTCCT GCAGTAAAGG GCACATGTTC AACATGTAAT TGTAAAGTCT TTCGTATAGG AAAAATGAAA AAATAG
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Protein sequence | MDKWADYLIS EVSYDANHLI SVAIRHQDTD KGITKGTPVD RLTISSDIKN GISYITIYSG KNSWKQGHRI RTFSIDGEPF LRIDGNKVEL DSLGDLPVVT SIDLDELDLA PEPVADEPIP EPAPPSPRGS LPKESAEELP QELDLAPEPV ADEPIPEPAP PSPRGSLPKE SAEELPQELD LAPEPVADEP IPEPEEEEAT PEQLARLEQL EKQIQELESK PEPAPPSPRG SLPKESAEEL PQELDLAPEP VADEPIPEPE EEEATPEQLA RLEQLEKQIQ ELESKPEPEE EEATPEQLAR LEQLEKQIQE LESKPEPEEE EATPEQLARL EQLEKQIQEL ESKPEPAPPS PRGSLPKESA EELPQELDLA PELEDEEATP EQFEQFEQLE KQIQELESKP ELEEEATPEQ FEQLDELQKQ IDELETKLSE KPVPEIKSEP EVEPIVEEYS EFNDLEDQID ELENELTSKL HPSDEATEEQ ISRVRELEKE IEKLESADIE HEIIQTLQKQ NKKLDEIEKK LEQSSKISSE TSSIEAYCVK CKTKRKIKNP EETIMKNGRP AVKGTCSTCN CKVFRIGKMK K
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