| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1544 |
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| Symbol | |
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| ID | 5773140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1406169 |
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| End bp | 1406774 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641317196 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001582878 |
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| Protein GI | 161529052 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0723] Rieske Fe-S protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000461965 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAGAGG TGGGGACGAA AAAGTCTACC GGATTATCCC GAAGAGACTT TCTAAAGTTA
ATGGGTGCAG CAGGAACTGG TTTAGCTTTT GCTCCATTTG TCCCATTTGG TAATTTCATG
CCAAACCCAA ATCAGGCTTC TCTTGAGAAA GTACCTGTAA TTCTACCTGA TGGCACTCAA
GCTAACGTTA ACACTTACCC AATAAATCAC GCTGAAGTCA TTACATATCC TGCAACCGGT
GATGCAGCAC TTGATGCTGA AGCATTTCGT AAATGGCAAT TCATTAGATT ACCTGAAGAA
TTAGGTGGAG CAAAAAATGA TCCTTCTGCA TTTAGAGCTT TCAGTATGAT TTGCCTTCAT
CTTTGGTGTT TGTGGAAATA TTGGCCTGAT GAGGGACGAA AAAGAGGTGA ATGCCCATGT
CATGGAAGTA TGTATGATCC AGTTTCTGGA ACTGCATATG TTGGTCCTGC ATCAGTACAA
GCTTCACCAT CAAACACTTT ACCTAAACTA ACTTTGGAAG TTGATTCAGA TGGATTAGTA
TTCATCTTGC CCCCAAAGTT TAACGCGCAA GAAAATGGAG TAATTGGATA TGGCCGTTTC
GCTTGA
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| Protein sequence | MSEVGTKKST GLSRRDFLKL MGAAGTGLAF APFVPFGNFM PNPNQASLEK VPVILPDGTQ
ANVNTYPINH AEVITYPATG DAALDAEAFR KWQFIRLPEE LGGAKNDPSA FRAFSMICLH
LWCLWKYWPD EGRKRGECPC HGSMYDPVSG TAYVGPASVQ ASPSNTLPKL TLEVDSDGLV
FILPPKFNAQ ENGVIGYGRF A
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