| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1525 |
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| Symbol | |
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| ID | 5774215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1385800 |
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| End bp | 1386762 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641317176 |
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| Product | nifR3 family TIM-barrel protein |
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| Protein accession | YP_001582859 |
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| Protein GI | 161529033 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000000166 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCTTCCAA AATTTTCTAG TAGGGCATTT TTAGCTCCTA TGGCAGGAGT TAGTGATCCT
GCATTGAGAT TACAATGCAA AAAAATGGGA GCTGGATTGG TAGTAACAGA ATTTACCAGT
ATTCATAGCA TTATTGCAAA AGAAGAACAA CTCAAAGAAA ATATGAAAAC AATTCAAGAA
TTCATTGAAT TTTCAGAACA AGAAAGACCT ATTTCTGTTC AATTGTTTGG TTCTGATCTT
TATGCATTAG AAAAAGCTGC AACTATTGTG GAACCATATT TTGATATTAT TGATTACAAC
ATGGGTTGTC CTGCTCCACA CATTACACAA CAAATGGCCG GTGGAGCTCT TTTGCAAGAG
GTAAATCTTA CACAACAAAT TTTCGAAACC CTTGTGAATG CTGTAAAAAA ACCTGTAACT
CTAAAGATTC GTTCTGGTGT AACTGATGCA AGTAAATTTC TCTTTAGAGA TATTGCAGAA
ATTGCAGAAG ATCAAGGAAT TCAAATGATA ACTTTTCATC CTAGAACTGT CAGTCAAGGA
TATTCTGGAA GTGCAGATTG GAAATTAATC AAGGAATTAA AAGAGATCTC CAATATTCCT
GTAGTTGGAA ATGGTGATAT TACTACTCCT GAAGATGCCA AAATGATGCT TGATGAGACT
GGTTGTGATT ATGTTATGAT TGGCCGTGGT GCCATGGGAA ACCCTTTCTT ATTTGAACAG
ATTAATGATT ATCTTAAAAC TGGTTCATAC AAAGAATATT CTTTCAAAGA TAGATTGGAT
TCTTTCTTTG ATTATCTTCA TCTTACAAAT CAATACAAAA TCAAATTCTC TAATATCAAA
AGTCAAGCTA TGAGATTTAC AAAAGGATTG AAGGGTGGTT CCAAACTACG TTCTAAAATC
ACATTTTCAA AAAATCTTGA AGACCTAGAA AAAATTATGC GTGAAGCATA TTCTATATCT
TAA
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| Protein sequence | MLPKFSSRAF LAPMAGVSDP ALRLQCKKMG AGLVVTEFTS IHSIIAKEEQ LKENMKTIQE
FIEFSEQERP ISVQLFGSDL YALEKAATIV EPYFDIIDYN MGCPAPHITQ QMAGGALLQE
VNLTQQIFET LVNAVKKPVT LKIRSGVTDA SKFLFRDIAE IAEDQGIQMI TFHPRTVSQG
YSGSADWKLI KELKEISNIP VVGNGDITTP EDAKMMLDET GCDYVMIGRG AMGNPFLFEQ
INDYLKTGSY KEYSFKDRLD SFFDYLHLTN QYKIKFSNIK SQAMRFTKGL KGGSKLRSKI
TFSKNLEDLE KIMREAYSIS
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