Gene Nmar_1469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1469 
Symbol 
ID5773646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1335702 
End bp1336520 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content34% 
IMG OID641317117 
Producthypothetical protein 
Protein accessionYP_001582803 
Protein GI161528977 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAA ATCCCGTAAT GCTTGATTCA GATTTCAAGT ATATCGACAA GAAAGGAAAT 
CTAATGAAGA CTAGAACAGA GTTGACAGTA GCACAAATGC TAGACTTTCT TGAAGACGAA
TACCAGTACA ATCACAAAGT TACATTGAAA AGTGGAACTG AAGTTACAGT TGATTTCAAA
ACTGACAAGG GACTAATTGA AGTAATTGAC AATGAAGAGG ACATTGCAAA GTACAAACAG
ATCAAAGAAG ACTTTCCTGA TCAAAAAGTA ATGGCAATTG GACACGGAAA GTATGCTGCA
CAGCTAAAAG AGTTGCAAGA TATTGTATTT TATGATAAAT CACCACAAAC AGGTTCTATC
TTTTTGGATG ATGGATCATT TGCATTTGAT TATGCACACA TCTTGCCACT AGTTGAGAAA
TGTTCGATTC TACATGGACA TACATCATCT GTAATGGTGG AATTGGTTGG ACAGATGAAA
GACAATCTAC TTGTAGACTT TGGAGAAGCA AAAAGAATTG TCAAAGATGT ATTGACTGCA
TTTGATCACA AGTTTTTCAT TAATAGAAAG TACATGAAAT CTGAAGATGA TTCTCATTAT
GTAATAAAAT TTGAAGGACC TAAAGGAATG TTTGAGTTAC AAGTTCCAAA ACATACAACA
TATCTTTTAG AAGGAGAAGC TACTGTAGAG AATTTATCAA GTGAGCTTAT CAAATTACTA
GCACCTAAGA TGCCATCAAA CGTTGAAGCT GTTGGCGTTT ACATTTACGA GGGATACAAC
AAGGGTTCCC ACATTATATC AAACATCTCA AAAGATTAA
 
Protein sequence
MTTNPVMLDS DFKYIDKKGN LMKTRTELTV AQMLDFLEDE YQYNHKVTLK SGTEVTVDFK 
TDKGLIEVID NEEDIAKYKQ IKEDFPDQKV MAIGHGKYAA QLKELQDIVF YDKSPQTGSI
FLDDGSFAFD YAHILPLVEK CSILHGHTSS VMVELVGQMK DNLLVDFGEA KRIVKDVLTA
FDHKFFINRK YMKSEDDSHY VIKFEGPKGM FELQVPKHTT YLLEGEATVE NLSSELIKLL
APKMPSNVEA VGVYIYEGYN KGSHIISNIS KD