Gene Nmar_1450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1450 
Symbol 
ID5773257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1320746 
End bp1321072 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content43% 
IMG OID641317098 
Product30S ribosomal protein S11 
Protein accessionYP_001582784 
Protein GI161528958 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC TTACTGGTGG AGAAACTGTT TCTATCAGTT CAGGTGGAAT TCATGTCAAT 
GCAGACAGAT ACGAATCATC ACCATTTGCT GCAATGAAAG CTGCAAATCA AGTTGTAGAA
TCTGCAAAGA CAAAAGGATT CACAGGATTT CACATCAGAG TTCGCGCAGT TGGTGGAGTT
GGTTCTAGAG TTCCAGGTCC AGGTGCACAA GCTGCAATCA GAGCATTAGC AAGAGGTGGA
TTTAAGATTG GAAGAATTGA TGATGTTACA CCTATTCCTC ATGACACCAC TAGAAAGAAG
GGTGGAAAGA GAGGAAGAAG AGTCTAG
 
Protein sequence
MTDLTGGETV SISSGGIHVN ADRYESSPFA AMKAANQVVE SAKTKGFTGF HIRVRAVGGV 
GSRVPGPGAQ AAIRALARGG FKIGRIDDVT PIPHDTTRKK GGKRGRRV