Gene Nmar_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1446 
Symbol 
ID5774381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1316841 
End bp1317122 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content36% 
IMG OID641317093 
Producthypothetical protein 
Protein accessionYP_001582780 
Protein GI161528954 
COG category[K] Transcription 
COG ID[COG3432] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCCT ATAGAACTAG CATGCAAATT GTAGCTGATT TACTGACTGT TACTGAACAG 
TCTGGACAGG AAGGCATCAA GACAACCTCA CTATTAACAA AGGCCAATTT ATCACATTCC
AGACTATCCA AATTCTTGGA TAACTTGACT GGAGCAGGCC TAATCAACAA AATCGAATAT
GACGGAAAGA ACACTTTTGT AATTACACCA AAAGGAAGAC AATATTTGGA ATCTTATGCA
AACTTTTCAA GTATTGCTGA ATCATTTGGT CTAGAACTCT AA
 
Protein sequence
MVSYRTSMQI VADLLTVTEQ SGQEGIKTTS LLTKANLSHS RLSKFLDNLT GAGLINKIEY 
DGKNTFVITP KGRQYLESYA NFSSIAESFG LEL