Gene Nmar_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1417 
Symbol 
ID5774493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1295485 
End bp1295904 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content34% 
IMG OID641317063 
ProductNUDIX hydrolase 
Protein accessionYP_001582751 
Protein GI161528925 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAG AGACATCAGC AGGAATAGTA TTGTTTAGAA AAGAGGACTC TAAGAATTTG 
TTTTTACTTT TACATTATCC ATCAGGTCAT TGGGATTTTG TAAAAGGTAA GATGGAAAAA
GGTGAATCAA CACATGAAAC TGCAGTAAGA GAAACAAAAG AAGAGACAGG GATAACTGAT
GTGAATTTTG TAGAAGGGTT TGAAGAGTGG ATAGAATACA ATTTTCAATA TCAAAAGGAG
CTTGTTCACA AAAAAGTTGT CTTCTTTTTG GCGGAAACTA CAACTAAAGA AGTAAACATT
TCACATGAGC ATCTTGATTA CACATGGATG GATTACAATA CTGCAATGGA AAAGACTACG
TTTGATAATG CAAAGACAGT TCTAACTAAA GCTCAGATGC TACTTTCCAA GACTGTCTAG
 
Protein sequence
MIEETSAGIV LFRKEDSKNL FLLLHYPSGH WDFVKGKMEK GESTHETAVR ETKEETGITD 
VNFVEGFEEW IEYNFQYQKE LVHKKVVFFL AETTTKEVNI SHEHLDYTWM DYNTAMEKTT
FDNAKTVLTK AQMLLSKTV