Gene Nmar_1415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1415 
Symbol 
ID5773071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1293472 
End bp1294617 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content37% 
IMG OID641317061 
Producthypothetical protein 
Protein accessionYP_001582749 
Protein GI161528923 
COG category[S] Function unknown 
COG ID[COG2237] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAC GCTCAGACAA GGTTGAAAAA GATGTCAACG CATCTACTGC CAACAAATTA 
CTCGTAATTT GTGTAGATAG AGACAATGAT GTAGGTGAAA AGGCAGGCAT CGTAACGCCA
GTAATTGGGA GAGATGCATG CATTGAGGCA GCACAGAGAT TAGCATTAGA AGATCCTGAA
GATGCAGATT CTAATTCAAT ATTTTCTGCA ATCAAAACGT ATGAAGACTT GGTAAGTAAG
GGATATCAGG TTGAAGTTGT TACAGTTGCA GGTGTAAAAG ATAGAGGCGT TCAAGCTGAT
GAGAAAATTC TTAGTGAAAC AAGAAAGGTT TTAGATAAAT TTTCTGCAAA TGGCGCAGTT
ATAGTTTCAG ATGGTGAAGA TGATGAAAGT GTTATTCCAG TAATTCAAAA TGTTCTACCA
GTAGTTTCAG TGCAACGTGT TGTAATGAAA GTAAGCAGAA GTGTAGAGTA TTCCTATGCA
GTATTTGGAA AATATCTTAA AATGATTGCA TATGATTCAA GATATTCAAA ATTTTTCTTG
GGAGTTCCAG GAATCCTTTT GTTAATTGGT GGTGTTGCAT CCGTATTTGG AATTACTACT
GAAATTTTTG CAGTACTTGT TAGTATTTTA GGTGGTGCAT TTTTGATTAG AGCATTTGAT
ATTGACAGAG TATGGTCAAG CTGGTCAAAA CCGACGCCGA TGGGTTTTAT CAGAATGTTT
ACAATGGTTG CAGGAATATT GTTGATACTT TCATCAGTAC CAGCTGGTGT TGCATCAATT
GATCCAGAAT TAGCTGAGGC AGATACTACA TTTGTTGCAA AGATAACTGA TCAAGTAATT
ATCGGTCAGT TTGTTGCAGG AGTATTACCA ATATTGTGGA CAGGACTTGG TGCAATCTTT
GCAGGAACTT TACTTAGTAA CTGGATTGGA GGAGTACCAA GACAAATCAG CGACATATTG
AGAATAATTG TGCTCATAGC TTTGTATCCA ACAATCTACC AGTTTACAAA CATCATGATT
TCTGATGTGA GTTCATTTAC ATTGATTCCT CCACTTTTAG GGGGACTGGC AGCAACCTTG
GTTTCAGCCA CAATTCTCTT CAAAAAATAC AGAAAACACA AAGACCAAGA GATGGTTTCT
GATTAA
 
Protein sequence
MSQRSDKVEK DVNASTANKL LVICVDRDND VGEKAGIVTP VIGRDACIEA AQRLALEDPE 
DADSNSIFSA IKTYEDLVSK GYQVEVVTVA GVKDRGVQAD EKILSETRKV LDKFSANGAV
IVSDGEDDES VIPVIQNVLP VVSVQRVVMK VSRSVEYSYA VFGKYLKMIA YDSRYSKFFL
GVPGILLLIG GVASVFGITT EIFAVLVSIL GGAFLIRAFD IDRVWSSWSK PTPMGFIRMF
TMVAGILLIL SSVPAGVASI DPELAEADTT FVAKITDQVI IGQFVAGVLP ILWTGLGAIF
AGTLLSNWIG GVPRQISDIL RIIVLIALYP TIYQFTNIMI SDVSSFTLIP PLLGGLAATL
VSATILFKKY RKHKDQEMVS D