Gene Nmar_1384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1384 
Symbol 
ID5773336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1267307 
End bp1267606 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content39% 
IMG OID641317030 
Product50S ribosomal protein L21e 
Protein accessionYP_001582718 
Protein GI161528892 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2139] Ribosomal protein L21E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTA AGAAATCTTC TGGTCGTTCA CATGGATTCA AACACAAATC CAGATCAGTT 
ATGAAAAAAG ATGCTCCTAG AGGAGTCTCA TTCCTGTTAC GTGAATACAA AGAAGGTCAA
CAAGCACTTG TCATTATAGA TCCTAGACAG CACAAAGGAT TACCTCACAG AAGATACCAC
GGCAAAGTCG GTATGATCAC AAATGTGGGA AGACGTGCAG TCACTCTAGA TGTAAAATTA
GGAAACAAAT CGAAAACCTT AATCACTAGA TTGGACCACA TAAAACCATT CGGTGTATAA
 
Protein sequence
MATKKSSGRS HGFKHKSRSV MKKDAPRGVS FLLREYKEGQ QALVIIDPRQ HKGLPHRRYH 
GKVGMITNVG RRAVTLDVKL GNKSKTLITR LDHIKPFGV