Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1304 |
Symbol | |
ID | 5774643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1193703 |
End bp | 1194149 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641316948 |
Product | signal-transduction protein |
Protein accession | YP_001582638 |
Protein GI | 161528812 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0000185547 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAAATTCA GTAAATCCTT TGAAATATTA CGTGACACAA CCTTTTACAT GAGTTCTGAC ACTGTTCATC AGAAAACTCT TGTCAAAGAA ATTATGAGCA ACTCTGTTAT CTCTGTAGAT TCTTCTATTA CAGCAACTGA TGCTGCAAAA ATGATGGAAG ACACTGGCGT TGGTGCAATT GCCGTATTAG AAAATGGCTC CCCTGTTGGA ATTGTAACTG ATAGAGATTT TGCAATAAAA ATTACTGCTC ATTCATATCC TATTGATACT CCTATCCGAA GAATAATGTC TGCCCCTCTC ATTTCTATTG ATCCTAATTC TGATCTATGG ACTGCTTCTG ATTTAATGAC AACAAGAAAT GTTCGGAAAC TACCTGTAAT TGATGATGAT CGAATTATTG GTATACTCAC TTCCAGTGAT CTGGTCAAAT ATTTTGCTAG TCTTTAA
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Protein sequence | MKFSKSFEIL RDTTFYMSSD TVHQKTLVKE IMSNSVISVD SSITATDAAK MMEDTGVGAI AVLENGSPVG IVTDRDFAIK ITAHSYPIDT PIRRIMSAPL ISIDPNSDLW TASDLMTTRN VRKLPVIDDD RIIGILTSSD LVKYFASL
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