Gene Nmar_1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1276 
Symbol 
ID5773507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1170971 
End bp1171528 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content32% 
IMG OID641316920 
Producthypothetical protein 
Protein accessionYP_001582610 
Protein GI161528784 
COG category[S] Function unknown 
COG ID[COG3398] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.121315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTT TTCAGAGAAA TGTATCAAAG TTGATATGTA AAAAACATCT AATCTATACA 
TTGGATAGAA AGACAAAGAT TCTAAAAATT ATTCAAGCAA ATCCTGGAAT CCATGTTAGG
GGAGTGATAA AAGAGTCTAG TTTTGAAAAT GGTGTAGTTA CACATTATTT GAGACAGTTA
ACAGAAGATG GAGTCGTAAG GACACAGAAA CGTTCTAGAT ATCATAGGTA CTATCCAGTA
GATGTTGAAG AAAAAGAGTT CCCAGTAATT AGGAATATGC GCAAGCCAAC AAAAAAAGAG
ATACTCTTTA GAATTATGGT AGAAGGTAAT CCATCATTCA AAGATCTTAC CCTAAAAATT
GACAAAAGTC CTTCAACAAT ATCCTGGAAT GTATCTGAAC TTGTGAAAGA AGGAGTAGTT
GAGAAATGCA AAAAAGATGG CAAGCAATGT TACAGGGTAA AAGACAAAGA ACTTTTCAAA
AAAACATTCA AAAAAGAATT CACTAAATTA TTTGATGAAA AACTAGAGCA CTCTGAAGAT
ATCTTTTTGG CATTATAG
 
Protein sequence
MKFFQRNVSK LICKKHLIYT LDRKTKILKI IQANPGIHVR GVIKESSFEN GVVTHYLRQL 
TEDGVVRTQK RSRYHRYYPV DVEEKEFPVI RNMRKPTKKE ILFRIMVEGN PSFKDLTLKI
DKSPSTISWN VSELVKEGVV EKCKKDGKQC YRVKDKELFK KTFKKEFTKL FDEKLEHSED
IFLAL