Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1276 |
Symbol | |
ID | 5773507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 1170971 |
End bp | 1171528 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641316920 |
Product | hypothetical protein |
Protein accession | YP_001582610 |
Protein GI | 161528784 |
COG category | [S] Function unknown |
COG ID | [COG3398] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.121315 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTT TTCAGAGAAA TGTATCAAAG TTGATATGTA AAAAACATCT AATCTATACA TTGGATAGAA AGACAAAGAT TCTAAAAATT ATTCAAGCAA ATCCTGGAAT CCATGTTAGG GGAGTGATAA AAGAGTCTAG TTTTGAAAAT GGTGTAGTTA CACATTATTT GAGACAGTTA ACAGAAGATG GAGTCGTAAG GACACAGAAA CGTTCTAGAT ATCATAGGTA CTATCCAGTA GATGTTGAAG AAAAAGAGTT CCCAGTAATT AGGAATATGC GCAAGCCAAC AAAAAAAGAG ATACTCTTTA GAATTATGGT AGAAGGTAAT CCATCATTCA AAGATCTTAC CCTAAAAATT GACAAAAGTC CTTCAACAAT ATCCTGGAAT GTATCTGAAC TTGTGAAAGA AGGAGTAGTT GAGAAATGCA AAAAAGATGG CAAGCAATGT TACAGGGTAA AAGACAAAGA ACTTTTCAAA AAAACATTCA AAAAAGAATT CACTAAATTA TTTGATGAAA AACTAGAGCA CTCTGAAGAT ATCTTTTTGG CATTATAG
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Protein sequence | MKFFQRNVSK LICKKHLIYT LDRKTKILKI IQANPGIHVR GVIKESSFEN GVVTHYLRQL TEDGVVRTQK RSRYHRYYPV DVEEKEFPVI RNMRKPTKKE ILFRIMVEGN PSFKDLTLKI DKSPSTISWN VSELVKEGVV EKCKKDGKQC YRVKDKELFK KTFKKEFTKL FDEKLEHSED IFLAL
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