Gene Nmar_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1269 
Symbol 
ID5773790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1165474 
End bp1166622 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content38% 
IMG OID641316913 
Productmajor facilitator transporter 
Protein accessionYP_001582603 
Protein GI161528777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.59177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACGTA TGTTGAAATT AGGTCAAACG GAATTTTCAA GTACATTTAT GCAAAAAGTT 
CAAGTAAACA ATTTAGTACG AAGTGCCACA TTTTTTCAGC ACGCTGGTAT CTCAATTGTC
TTTGTTTTCA TGCCTATTAT TGCTCAAGGC GTCACAGAAT CAGTCTTTGA GATAGGCCTT
TTGGTAGCCT CATTTAGTTT TGCCCAGATT CTCTCGGAAA TCTACTTTGG TAGGCACTCA
GACAAGAAGG GAACCAGGCT CAAGTTCATC AGAATTGGAT TCATCGGCTG TGCAATAGCA
TTTGGAATGC ATTACTTTGC AACAGATCTT TCCATGTTCT TTCTGGTAAG AATTGCAGCA
GGAATTGCAA GTGGAATAAT GATTCCAGCA ATGATTGCAT ATACCTATGA AGCAAACGTT
GACAAAAAAA GAGCAGCAAC AGTAATCTCA TTTCATGCAT TAGGGTGGAT GGCAGGAATT
GCAGCAGCTG GACTTGCAAA TGACTTGCAG TTAATTTTCT TGATAAGTGC AGCATCATTT
GTAGTAGGGC TGTTATTTAC AATCAGACTC CCAAATCCTG AGCAAGAAAA AGAAGTAGAG
CCTGGAACTA CAAAAAGAGT AATTTCAAAA AACAAATTTC TTTTCTTGTC ATTACTGCTA
AGACATATTG GTGCTGCTGC TGTTTGGACC ATTCTTCCAA TAATGATTGT AGATAGATGG
GGAGGAGAAC TATACCACAT TTCAATTGTG TATACTGCAA ACACAATGAC TGCTTTTATT
TTGATGAATG TAATGGCAAG TAAAATTCAT CTATCAAATG TCACTAAATT CAAGATAGGA
GTCGGCTCTA CAACATTTGT TTTTGTAGGG TTGTCATTTG TAACTGAATG GTGGATGGCA
ATGCCATTTA TGTCACTGGT TGGTGCAACA TGGGCATTCT TGTTTATTGG TGGAAACTTT
CACTTAATGG ACAACAACCC ACGTTCAACT TCAACTGGGA TATTTAGCTC AACTCTATCA
ATTGCAACAG TAGTTGGTCC TGTAATTGCA GGTGGAATTG CATTTGCATT TGACTATGTT
GCAGTGATGT ACTTTGCAAT TGCCATCATT GTTAGTGCCT TTGCAGTATC ACTGAAAATC
AAAAAATAA
 
Protein sequence
MIRMLKLGQT EFSSTFMQKV QVNNLVRSAT FFQHAGISIV FVFMPIIAQG VTESVFEIGL 
LVASFSFAQI LSEIYFGRHS DKKGTRLKFI RIGFIGCAIA FGMHYFATDL SMFFLVRIAA
GIASGIMIPA MIAYTYEANV DKKRAATVIS FHALGWMAGI AAAGLANDLQ LIFLISAASF
VVGLLFTIRL PNPEQEKEVE PGTTKRVISK NKFLFLSLLL RHIGAAAVWT ILPIMIVDRW
GGELYHISIV YTANTMTAFI LMNVMASKIH LSNVTKFKIG VGSTTFVFVG LSFVTEWWMA
MPFMSLVGAT WAFLFIGGNF HLMDNNPRST STGIFSSTLS IATVVGPVIA GGIAFAFDYV
AVMYFAIAII VSAFAVSLKI KK