Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1251 |
Symbol | |
ID | 5773562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1148438 |
End bp | 1148926 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641316895 |
Product | HEAT repeat-containing PBS lyase |
Protein accession | YP_001582585 |
Protein GI | 161528759 |
COG category | [C] Energy production and conversion |
COG ID | [COG1413] FOG: HEAT repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAAGTAG TTACTGATGA TCGATTGACT CTTTTTGCTG AAATGGAAAA AAAGTATGAG CAAAAGGATA CTGAATACTT TGTAAAACTC TTAGATCATC CTGATTATGT GGTTAGAACC AGAGCTACGT GTATTTTAGT TGATTTTGGT GGAGAAGATA AAGTTCCCTA TATTGCCAAA GTTTTGAAAG ATGATGATAA TGAATTGGTA AGACATGAAG CTGCCTTTTC TCTAGGCCAG ATGTGTTATT CTAGTTCGGT CCCACCACTA ACTGATGCAA CTCTAAATGA TCCTAGTATG TTTGTAAGAC ATGAAGCTGC AATTGCGTTG GGTGTTGTTG GCAATAAGGA TGCAAAAGAC GCATTGGAGA AGGCATTAGA TGATCCTGAT AAACCCGTAG TAGAATCTGC TGTTGTAGCT CTATCTAATA TCGAATTTAT GGAAAAGTTA AGTATGAACG AAAAGTTTGC AAAGTTAACA GGTGGATGA
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Protein sequence | MQVVTDDRLT LFAEMEKKYE QKDTEYFVKL LDHPDYVVRT RATCILVDFG GEDKVPYIAK VLKDDDNELV RHEAAFSLGQ MCYSSSVPPL TDATLNDPSM FVRHEAAIAL GVVGNKDAKD ALEKALDDPD KPVVESAVVA LSNIEFMEKL SMNEKFAKLT GG
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