Gene Nmar_1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1251 
Symbol 
ID5773562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1148438 
End bp1148926 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content37% 
IMG OID641316895 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_001582585 
Protein GI161528759 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAAGTAG TTACTGATGA TCGATTGACT CTTTTTGCTG AAATGGAAAA AAAGTATGAG 
CAAAAGGATA CTGAATACTT TGTAAAACTC TTAGATCATC CTGATTATGT GGTTAGAACC
AGAGCTACGT GTATTTTAGT TGATTTTGGT GGAGAAGATA AAGTTCCCTA TATTGCCAAA
GTTTTGAAAG ATGATGATAA TGAATTGGTA AGACATGAAG CTGCCTTTTC TCTAGGCCAG
ATGTGTTATT CTAGTTCGGT CCCACCACTA ACTGATGCAA CTCTAAATGA TCCTAGTATG
TTTGTAAGAC ATGAAGCTGC AATTGCGTTG GGTGTTGTTG GCAATAAGGA TGCAAAAGAC
GCATTGGAGA AGGCATTAGA TGATCCTGAT AAACCCGTAG TAGAATCTGC TGTTGTAGCT
CTATCTAATA TCGAATTTAT GGAAAAGTTA AGTATGAACG AAAAGTTTGC AAAGTTAACA
GGTGGATGA
 
Protein sequence
MQVVTDDRLT LFAEMEKKYE QKDTEYFVKL LDHPDYVVRT RATCILVDFG GEDKVPYIAK 
VLKDDDNELV RHEAAFSLGQ MCYSSSVPPL TDATLNDPSM FVRHEAAIAL GVVGNKDAKD
ALEKALDDPD KPVVESAVVA LSNIEFMEKL SMNEKFAKLT GG