Gene Nmar_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1165 
Symbol 
ID5774517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1066715 
End bp1067632 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content41% 
IMG OID641316808 
ProductMT-A70 family protein 
Protein accessionYP_001582499 
Protein GI161528673 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4725] Transcriptional activator, adenine-specific DNA methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATG AGACACTTTT GCAGGACTTG CCTTTGGGTC AGCAAATAGA AATTACAGAA 
AACACAATTC GAAAAAACTT CACGTTTTCT GAAATGTGTG AGATAATTTC CAAGCTAAAA
CCCAAGCTAG ATGAAGAGGC CAAAAAACGC CGCCAAGCTG GTGTCAAATT ATCACCAGGT
GAGCCAAAAT TCAAGGTTCG TGACGAAATT GCGCATTATG TAGGCGTGTC TGGAGGCCAA
ATTGACAAAA TCATGGCAAT AGAGCAGCAG GTGAGGGAAA ATCCAAAGGA ATTTGGCAAT
ATCCCTCAAA GAATAGAGTC CGGTATGAGC ATAGACTATG CTCACAAAAT GATCAACACT
GCAAAAAAGG CCACAACTCC AACTCCCAAT CTGCCAAAAA ACCAGTACGA GGTAATTGTT
GCAGATCCTC CCTGGAAATA TGACTTGCCA TTAGAAGGAG CACCTGATTA CAAAACAATG
ACACTTGAAG AAATGAAATT GGAGATTCCT AATGTTCCCT CATACAAGGA CTGCATTTTG
TTTATGTGGA CTACGAATCC CAAACTTGAC GAGGCATTGT CTCTTATGAA ACATTGGGGT
TTTACTTACA AAACAAACAT GGTGTGGGTA AAACAAAAAA ACAACAAACT GCAAAACGGT
ACTGGGTATT ACTTTAAGGG ATCACATGAG CTTCTGCTTG TTGGCACCAA AGGAAACCCA
GGAGTTCCAC CAGAGTCTGT ACGTGTGTCC TCTGTTGGAA TGGCAGAAAG AACAAGACAC
TCTGAAAAGC CTCGCATGTT TTATCGTATG ATTGAAAAAT ACTATCCTGC AAAAAAGAAG
TTTGAAATGT TTGCAAGGGG CAAAGACTCT GCAGATGACG GAACATGGAC TTATTGGGGA
GATTCCGTCC AAGACTAA
 
Protein sequence
MIDETLLQDL PLGQQIEITE NTIRKNFTFS EMCEIISKLK PKLDEEAKKR RQAGVKLSPG 
EPKFKVRDEI AHYVGVSGGQ IDKIMAIEQQ VRENPKEFGN IPQRIESGMS IDYAHKMINT
AKKATTPTPN LPKNQYEVIV ADPPWKYDLP LEGAPDYKTM TLEEMKLEIP NVPSYKDCIL
FMWTTNPKLD EALSLMKHWG FTYKTNMVWV KQKNNKLQNG TGYYFKGSHE LLLVGTKGNP
GVPPESVRVS SVGMAERTRH SEKPRMFYRM IEKYYPAKKK FEMFARGKDS ADDGTWTYWG
DSVQD