Gene Nmar_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1160 
Symbol 
ID5773238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1061437 
End bp1062276 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content33% 
IMG OID641316803 
ProductGp37Gp68 family protein 
Protein accessionYP_001582494 
Protein GI161528668 
COG category[S] Function unknown 
COG ID[COG4422] Bacteriophage protein gp37 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTGG CAATTGGGTC GGGGATTGAG TGGACAGAGG CAACGTGGAA CCCCACAAGT 
GGCTGTTCAA AAATTTCTCC AGGTTGTAAA AATTGCTATG CAGAGACACT TACTAAAAGA
TTGAAAGCTA TGGGGCAACA AAAATATAAA AAAGGATTTC AATATGTGGA ACACCCTTCA
GATGTCAATC TACCACTAAC ATGGAAAAAG CCCAAAAAGA TTTTTGTTAA TAGCATGTCA
GATCTTTTCC ACGAAAACTC AACATTTGAG TTTACAGGCA AATGTTTTGC AACAATGATT
CAGGCTGATC GTCATGATTA TCAAATTTTA ACAAAACGTC CAAAAAGAAT GGCAGAATTC
TCAAAAATAT TTTTTGAATA TTTTGGTCAT AAAATTCCTA ATTTCATGTG GATGGGAACA
AGTATTGAAA ATAAACAATA TGTTTCAAGA ATCAAAGATC TTCGAAAAGT CAAATGCCAT
ACAAGATTCA TTAGTTTTGA ACCTCTTATT GGTTCAGTTG GAAAAGTGAA CCTAAAAGGT
ATTGATTGGG CAATAATTGG AGGAGAAAGT GGTCATCATT TTAGAAAAGT AAAGAAAGAA
TGGATTGAAG AGATAATTGA TCAATGTAAA GAACAAGAAG TTCCAGTATT TTTCAAACAA
TGGGGAGGAT TCAGACCAAA ATCTGGAGGA AGAACAATTA ACAGAAGAAA GTATAGTGAA
TATCCAGAAA TTGAGAAAAG AAATTCTTTG AAAAATGTTA ATTTTGATGA AATTGCCTTT
GCAGAAATGT GTATGAAACA CGAAGCAATG AAAAGGGAAC AAATGCTTGT AAAAAATTAA
 
Protein sequence
MSLAIGSGIE WTEATWNPTS GCSKISPGCK NCYAETLTKR LKAMGQQKYK KGFQYVEHPS 
DVNLPLTWKK PKKIFVNSMS DLFHENSTFE FTGKCFATMI QADRHDYQIL TKRPKRMAEF
SKIFFEYFGH KIPNFMWMGT SIENKQYVSR IKDLRKVKCH TRFISFEPLI GSVGKVNLKG
IDWAIIGGES GHHFRKVKKE WIEEIIDQCK EQEVPVFFKQ WGGFRPKSGG RTINRRKYSE
YPEIEKRNSL KNVNFDEIAF AEMCMKHEAM KREQMLVKN