Gene Nmar_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1115 
Symbol 
ID5774677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1019051 
End bp1019371 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content31% 
IMG OID641316757 
Productcupin 2 domain-containing protein 
Protein accessionYP_001582449 
Protein GI161528623 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.378995 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACTAG AATTTGATTT AACCACGTAT CTAGAAAAAA TCAAAAACAG CAGTGATTAT 
TTTCACACTT TTATTAATCG AGATAGTTTA GCTGCTGGAG TTTTAGTTCT TCAACCTGGA
GAAGAAGATA CACAAACTCC TCATGATAGT GATGAAGTCT ATTATGTGAT TTCTGGTGAT
GGATTTTTAC GAATTAAGGA TAAAGATTAC AAGGTTTCAA AAGATAAGCT GTTTTTTGTT
GCAAAAGATG TTGAGCATTA TTTTCATGGA AATACAAAAG AGCTCAAAGT TTTGTACTTT
TTTGGTGGCC CTGATTCTTA A
 
Protein sequence
MKLEFDLTTY LEKIKNSSDY FHTFINRDSL AAGVLVLQPG EEDTQTPHDS DEVYYVISGD 
GFLRIKDKDY KVSKDKLFFV AKDVEHYFHG NTKELKVLYF FGGPDS