| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1055 |
|---|
| Symbol | |
|---|
| ID | 5773374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 930363 |
|---|
| End bp | 931784 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641316697 |
|---|
| Product | peptidase U62 modulator of DNA gyrase |
|---|
| Protein accession | YP_001582389 |
|---|
| Protein GI | 161528563 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCC AACTAGAAGA ATTTGCAGAT TATGCCATAA AATATGCAGA TGATGCAAAA
GTGCAGTATT GTGACATAAG ATCTGAAGAA CAAGAAAGAG TATCAATACT AATTGAAAAT
GGAGAAACAG AACACGTTAG AACAATTAAT GATTCAGGAA TTGGAATAAG ATTAGTAAAA
GATGGGACAT GGAGTTTTTG TTCAATTACA AATCCAGAAT CAAAAGAGCA AGTAAGAAAA
GCAATTGACA GTTCCATTAA AAATTCAATG CATTATGCAA AAAACAAAAA AGAATCATTT
TCACTTTATC CAAATAAAAG CATTCAAAAA AAGATAGACT ACCATACAGA ACAAAAACCA
AACTTAGAGG AATTAATCAA AATAGGCACA ATATGTAACA AAATCATTTC AGATACTCCA
AAAATTATCA AATCAATAGT AAATCCATGG TATACAAATA ACTCAAAATA TTTTGCAAAC
AGTGAAGGCT CAAAAATTTC ACAGAATTTT TCAGATGTTG TAATTGATAT GGTTGCTATT
GCACACGAAT CAGGATTAAC TCAATCAGTA AACATAACAG AAGGTGGTAG AGGTGGCATA
GAACAAATTA CTAAAGGAGA CAAAGCACAA AACAGCGCAC AAGAGATTGC AAAAAAGGCA
TCGAAATTAT TATCAGCAAA ACCTGCAAAA GAAGAAAAAG CCACCGTGGT TATGAATCCA
GATTTTGTTT CATTACTCAC ACACGAAATA TTGGGTCACC CATCAGAGGC AGACAGAGTT
TTAGGAAAAG AGATGGCATG GGCAGGAGGA GCATGGTGGA AAGGAAAAAT TGGAGAAAAA
ATTGGTTCTG AGCATCTAAA TGTCTTTGAT GATCCTACAA TTGAAGAGAG TTTAGGATGG
TATCTTTTTG ATGATGAGGG AGTTCAAACA AAAAAGACAA CTCTAGTAGA AGAAGGAGTT
TTGAAGAATC ATATGCAAAA TAGAGAGACA GGGAAAATTT TCAATGAAGA ACCCACTGGA
AATATGAGGG CAACAAACTA TCGATTCATG CCATTGATTC GAATGGCATG CACATGTATT
GAAAATGGAG ACTGGGATGT AGATGAAATG ATTAAAGAAG TAAAAAACGG ATATTTGATT
TCAAACATGA AGATTCCATC AATTGATATG AAGAGATACA ATTGGAGCAT ATCTTGTCAA
TATGCACAAA AAATTGAGAA TGGAGAAGTG ACTGACTTGC TTAGAGATGT CATTGTTATG
GGAACTGCGC CAGAATTTTT CCAATCAATT GACGCATGTG GAAATGACTT TACAGTAAGA
CCAATTACAA ATTGTGGAAA AGGAGATCCG ATGCAGTCAA TGATCATGGG AAATGGAGGA
CCTTCTATTA GAGGGGTTGC AACAGTAAAG AGTGTGAACT AG
|
|---|
| Protein sequence | MDTQLEEFAD YAIKYADDAK VQYCDIRSEE QERVSILIEN GETEHVRTIN DSGIGIRLVK
DGTWSFCSIT NPESKEQVRK AIDSSIKNSM HYAKNKKESF SLYPNKSIQK KIDYHTEQKP
NLEELIKIGT ICNKIISDTP KIIKSIVNPW YTNNSKYFAN SEGSKISQNF SDVVIDMVAI
AHESGLTQSV NITEGGRGGI EQITKGDKAQ NSAQEIAKKA SKLLSAKPAK EEKATVVMNP
DFVSLLTHEI LGHPSEADRV LGKEMAWAGG AWWKGKIGEK IGSEHLNVFD DPTIEESLGW
YLFDDEGVQT KKTTLVEEGV LKNHMQNRET GKIFNEEPTG NMRATNYRFM PLIRMACTCI
ENGDWDVDEM IKEVKNGYLI SNMKIPSIDM KRYNWSISCQ YAQKIENGEV TDLLRDVIVM
GTAPEFFQSI DACGNDFTVR PITNCGKGDP MQSMIMGNGG PSIRGVATVK SVN
|
|---|
| |