Gene Nmar_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1050 
Symbol 
ID5774110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp925869 
End bp926360 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content38% 
IMG OID641316692 
Producthypothetical protein 
Protein accessionYP_001582384 
Protein GI161528558 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACTA GGGCTCAGGC ACTAATCCCC ATATCTATTG CTGCTGTTAT TATTGGGGTT 
GTAGGCTTGA TGTCTATTCC TGAAGAAAGT AAGTTGGAAT CAGTTGAATT TCCTAGGGGT
ACGATCAAAG TTGATGATGT CCCGCTTGAA GTACAGATAG CAGATAATGA GCCTCGAAGA
GTACGTGGTT TGATGTTTCA AGATCAATTA CCCTATGATC AAGGCATGAT CTTTGTCTTT
GATGAATCTG GATTGTATTC TTTATGGATG CTTAATATGC AATTTTCACT TGATATGATG
TGGTTTGATG AAAATGGAAA AATGGTCCAC ATGGAACAAG ATGTACCTCC ATGCAAAGCC
GCTCTAGAAA TTGCTACATG TCAAAGTGTG GTACCTGAAA ATGAAGCATT GTATGTTCTT
GAGGTGACTG CTGGCTTTAT TGAACAAAAC AACATCACAA AAGATTCTGT TCTAACAATA
ATTTCAATTT AG
 
Protein sequence
MTTRAQALIP ISIAAVIIGV VGLMSIPEES KLESVEFPRG TIKVDDVPLE VQIADNEPRR 
VRGLMFQDQL PYDQGMIFVF DESGLYSLWM LNMQFSLDMM WFDENGKMVH MEQDVPPCKA
ALEIATCQSV VPENEALYVL EVTAGFIEQN NITKDSVLTI ISI