Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1050 |
Symbol | |
ID | 5774110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 925869 |
End bp | 926360 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641316692 |
Product | hypothetical protein |
Protein accession | YP_001582384 |
Protein GI | 161528558 |
COG category | [S] Function unknown |
COG ID | [COG1430] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACTA GGGCTCAGGC ACTAATCCCC ATATCTATTG CTGCTGTTAT TATTGGGGTT GTAGGCTTGA TGTCTATTCC TGAAGAAAGT AAGTTGGAAT CAGTTGAATT TCCTAGGGGT ACGATCAAAG TTGATGATGT CCCGCTTGAA GTACAGATAG CAGATAATGA GCCTCGAAGA GTACGTGGTT TGATGTTTCA AGATCAATTA CCCTATGATC AAGGCATGAT CTTTGTCTTT GATGAATCTG GATTGTATTC TTTATGGATG CTTAATATGC AATTTTCACT TGATATGATG TGGTTTGATG AAAATGGAAA AATGGTCCAC ATGGAACAAG ATGTACCTCC ATGCAAAGCC GCTCTAGAAA TTGCTACATG TCAAAGTGTG GTACCTGAAA ATGAAGCATT GTATGTTCTT GAGGTGACTG CTGGCTTTAT TGAACAAAAC AACATCACAA AAGATTCTGT TCTAACAATA ATTTCAATTT AG
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Protein sequence | MTTRAQALIP ISIAAVIIGV VGLMSIPEES KLESVEFPRG TIKVDDVPLE VQIADNEPRR VRGLMFQDQL PYDQGMIFVF DESGLYSLWM LNMQFSLDMM WFDENGKMVH MEQDVPPCKA ALEIATCQSV VPENEALYVL EVTAGFIEQN NITKDSVLTI ISI
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