| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1039 |
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| Symbol | |
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| ID | 5773313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 913430 |
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| End bp | 913966 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 641316681 |
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| Product | tRNA intron endonuclease |
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| Protein accession | YP_001582373 |
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| Protein GI | 161528547 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1676] tRNA splicing endonuclease |
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| TIGRFAM ID | [TIGR00324] tRNA intron endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGAG AATTAATTGA AAACAGAGTG ATTGTTTGGA ATATTGAAGA TTCTCGAAAG
CTGTTTGGTG GCGGATATTA TGGGAAACCC ATAGGCATTC CAAAACCAAA AATCGAAGAG
ATTGATGCTC CTCTTGTTTT AGATTTAATT GAATCGTTAT ACTTACTAGA AAATAAAAAA
ATATCAATTT CAAAATCAAA ACATAAAGTT ACAGTAGAAC AAATGATAGA TATTTGTAAA
AATGAACATC ATGATTTTGA TAAAAAATAT TTAGTGTACA AGAACTTTAG AGATAAAGGA
TACATCATTA ATCCAGGAAT AAAGTTTGGT TGTGATTTTG CAGTTTATGA GAAAGGTCCA
GGAATAGACC ACGCACCATT TTTGATTCAA GTGTACAATA GAAGTGAACC AATAACGTCA
ACAGGAATTG TACTTGCAGG TAGACTTGCA ACGTCAGTGA AAAAACAATT CATCTTAGCA
ATTCCCAAAG GTAAAGACAA TGTAGATTTT TTGGCTTTAG ATTGGTGGAA AGCCTAA
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| Protein sequence | MKGELIENRV IVWNIEDSRK LFGGGYYGKP IGIPKPKIEE IDAPLVLDLI ESLYLLENKK
ISISKSKHKV TVEQMIDICK NEHHDFDKKY LVYKNFRDKG YIINPGIKFG CDFAVYEKGP
GIDHAPFLIQ VYNRSEPITS TGIVLAGRLA TSVKKQFILA IPKGKDNVDF LALDWWKA
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