| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1034 |
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| Symbol | |
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| ID | 5773459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 907775 |
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| End bp | 909073 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641316676 |
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| Product | elongation factor 1-alpha |
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| Protein accession | YP_001582368 |
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| Protein GI | 161528542 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG5256] Translation elongation factor EF-1alpha (GTPase) |
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| TIGRFAM ID | [TIGR00483] translation elongation factor EF-1 alpha
[TIGR00485] translation elongation factor TU |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGATA AACCACACTT GAACCTGATT GTTACAGGTC ATATTGATAA TGGAAAATCA
ACAACTATGG GTCATTTCTT GATGGATCTT GGCGTTGTAG ATGAAAGAAC AATTGCATCC
CATGCATCCG AATCCGAGAA GACCGGAAAA GGTGATACTT TCAAGTATGC TTGGGTAATG
GATAACATTA AGGATGAAAG AGAGAGAGGT ATTACAATCG ATCTTGCATT CCAAAAATTC
GAGTCCCCAA AGTACTTCTT TACTTTGATT GACGCTCCTG GTCACAGGGA CTTTATTAAA
AACATGATTA CTGGTGCTTC TGAAGCCGAC GCAGCAGTCT TAGTACTTTC AGCTAAAGAA
GGTGAAACCG ATACTGCAAT TGCTGCAGGT GGTCAAGCAA GAGAACACGC ATTCTTGCTT
AAGACTTTAG GTGTAAACCA ACTAATCGTT GCAATCAACA AAATGGATGA TAGCAACTAT
TCTGAAGAAG CATTCAAAGT AGCCAAAGAA AAAGGTGAAA AATTAGTAAA ATCTGTAGGT
TACAAACTAG AAAATGTACC ATTCATTCCA GTTTCTGGAT GGAAAGGTGA CAACTTGGTT
AAAAAATCCG AAAACATGTC ATGGTACTCT GGTAAAACAC TACTTGAAGC ATTTGATGAC
TTTACAGTAT CTGAAAAACC AATCGGTAAA CCACTACGTG TTCCAATCCA AGATGTTTAT
ACCATCACTG GTGTAGGTAC CGTTCCAGTA GGTAGAGTTG AGACCGGAGT TATGAAAGCA
GGAGACAAAA TCGTCGTAAT GCCTTCAGGT GCTCCTGGTG AAATCAAATC TATTGAAACT
CACCACACAG AGATGCCATC TGCAGAAGCA GGTGATAACA TTGGTTTCAA CCTTAGAGGT
GTTGAGAAGA AAGACATCAA GAGAGGAGAT GTTCTCGGAA GTCCTGACAA CCCACCAAAT
GTTGCAAAAG AATTCAAAGC ACAAATTATT GTAATTCACC ACCCAACAGC AATCGCACCT
GGTTACACAC CAGTTATGCA CGCACACACT GCACAAGTTG CAGCAACAGT TACTGAGTTC
TTACAAAAGA TCAACCCAGC ATCTGGTGCA GTTGAGGAAG AAAATCCAAA ATTCCTCAAA
GTTGGTGACT CTGCAATTGT AAAAATCAGA CCGGTGAGAC CAACATGTAT CGAAACTTTC
CAAGAATTCC CTGAGATGGG TAGATTCGCC CTTAGAGATA TGGGTGCTAC TATCGCAGCA
GGAATCGTTA AGGAAATTAC CGAAGAGTAC AAACCATAG
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| Protein sequence | MADKPHLNLI VTGHIDNGKS TTMGHFLMDL GVVDERTIAS HASESEKTGK GDTFKYAWVM
DNIKDERERG ITIDLAFQKF ESPKYFFTLI DAPGHRDFIK NMITGASEAD AAVLVLSAKE
GETDTAIAAG GQAREHAFLL KTLGVNQLIV AINKMDDSNY SEEAFKVAKE KGEKLVKSVG
YKLENVPFIP VSGWKGDNLV KKSENMSWYS GKTLLEAFDD FTVSEKPIGK PLRVPIQDVY
TITGVGTVPV GRVETGVMKA GDKIVVMPSG APGEIKSIET HHTEMPSAEA GDNIGFNLRG
VEKKDIKRGD VLGSPDNPPN VAKEFKAQII VIHHPTAIAP GYTPVMHAHT AQVAATVTEF
LQKINPASGA VEEENPKFLK VGDSAIVKIR PVRPTCIETF QEFPEMGRFA LRDMGATIAA
GIVKEITEEY KP
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