Gene Nmar_1030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1030 
Symbol 
ID5773520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp905845 
End bp906354 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content36% 
IMG OID641316672 
ProductRossmann fold nucleotide-binding protein 
Protein accessionYP_001582364 
Protein GI161528538 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAAGA AACGTCAGAT CCTGGTAATT GGAAATAACA CTAATGGTTG TACTCCAGAA 
CATGAGAAAA TTGCATATGA TATCGGTGTA GAAATTGCAA AATCTGACTC TGTGTTGATT
ACTGGTGGAT TGGGTGGAAT AATGACTGCT GCATCTCGTG GTGCAAAAGA TACAGATGGG
TTAACTGTTG GAATAATTCC TCAAGATGAT GCTTCTGAGG CTAATGAGTA CTGTGATATT
GTAATTCCTA CTGGAATGGG ATTTACTCGT GATTTTCTTA ATGCACTGAG TGCTGATGGT
GTCATAATTG TTGGTGGTGG TTCTGGCACA TTATCTGAGG TTTGTGCATC ATACATGTCA
AAAAAACCAA TGGTTGCAAT TAGAAATCTC AACGGTTCAG TGGAACAATA TATTGATGGA
TATTTGGATC ATAGAGAAAA TGTAAAAATT GTTGGTGTAG ATAATGCTCA AGAAGCAGTT
ACAAAAATAA TAGAACTAAT CTCTGCATAA
 
Protein sequence
MVKKRQILVI GNNTNGCTPE HEKIAYDIGV EIAKSDSVLI TGGLGGIMTA ASRGAKDTDG 
LTVGIIPQDD ASEANEYCDI VIPTGMGFTR DFLNALSADG VIIVGGGSGT LSEVCASYMS
KKPMVAIRNL NGSVEQYIDG YLDHRENVKI VGVDNAQEAV TKIIELISA