| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0979 |
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| Symbol | |
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| ID | 5773571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 856416 |
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| End bp | 857327 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641316618 |
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| Product | transcription factor TFIIB cyclin-related protein |
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| Protein accession | YP_001582313 |
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| Protein GI | 161528487 |
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| COG category | [K] Transcription |
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| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.290745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTACAG AACTTGTACA TCAAAAGAGT TGTAAAAAAA ACAAGATTGT AACTGATCTG
AATACAGGAG AGATTGCATG CACGAATTGC GGTGCAGTAC TCTCTGAAAG AGTAGTTGAC
AGTGGTCCAG AAAGTCTAGG GATGACTGGA GAAGAATATC AAACCAACAG TAGAGTTGGA
AGAAAAATTT CATTAAAAAT GATAGACATG GGATTATCAA CCATTATTGA GGCTAAAGAC
AAAGATGCAA CAGGAAAAGG GCTATCAAAT GAGAACAAGA GAATGTTTTA TCGCCTAAGA
ATGTGGGATA GAAATAGTCG TTCTGCAAGT ACCGCCAAAT CATTTCAAAA GGCATTCACC
ATGCTTGATG GAATCAGTGC TAAACTAGGA CTTCCAGAGC CAGTAATAGA ACAAACTGCA
TATCTATTTA GAAAAATTGC TGCAAAAAAG ATTCTTGCAG GAAGATCTAC AGCAGGGATT
CTTTGTGCAG CAATTTACAT CACATGCAGA ATGACAAATA CACCAAGAAC TTTACAAGAT
GTGGCAAATG CTGGAAATGT AAATAAAAAA AACATTCAAA GAACATACAG ATTTCTTGCA
AGAGAATTAG ACATTACACC AGAAATTTAT CATCCAACAG AATTTGTAAC ACGAATTGCA
AAGGCAGTAG ACATCTCTGA GAAAACAGAA AGATTGGCAT TTAGAATTTT AGATCTTTCT
GCAAGAAACG GAGTATTAGA AAGTAAAAAT CCAATGGCAA TGGCTGCTGC TGCAACATAT
CTCGCATCAG TAAAAAACGA TGAAAGAATT TCTCAGTTAA AAATTTCCAA AGTCTCTGGC
ATTAGTGCAG TTACAATCAG AGATAGAACA AAAGAAATTT TGAAAAAGAT AGGAGGTGAA
ATTAATGGGT AG
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| Protein sequence | MITELVHQKS CKKNKIVTDL NTGEIACTNC GAVLSERVVD SGPESLGMTG EEYQTNSRVG
RKISLKMIDM GLSTIIEAKD KDATGKGLSN ENKRMFYRLR MWDRNSRSAS TAKSFQKAFT
MLDGISAKLG LPEPVIEQTA YLFRKIAAKK ILAGRSTAGI LCAAIYITCR MTNTPRTLQD
VANAGNVNKK NIQRTYRFLA RELDITPEIY HPTEFVTRIA KAVDISEKTE RLAFRILDLS
ARNGVLESKN PMAMAAAATY LASVKNDERI SQLKISKVSG ISAVTIRDRT KEILKKIGGE
ING
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