Gene Nmar_0974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0974 
Symbol 
ID5774670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp850799 
End bp851326 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content27% 
IMG OID641316613 
Producthypothetical protein 
Protein accessionYP_001582308 
Protein GI161528482 
COG category[S] Function unknown 
COG ID[COG3272] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.186024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAAAA AACAAGAAAT GACAGGCACA TCAAGATTAT CAGAACACGA TATCAAAGAA 
TACGTGCTAG AAAGATTCAA AGAGGTAAAA AAAGAGAAAA TAAAAAATCT TGTTTCATTT
CAATCTATGA ACAAATACAT GATTATGGCA CATAATCAAG ATGAATTACA AATTTTAGGA
AATATTGTTG CCGGTTACAA AAAAATTTCA TTGTTAGATA TAATGACAGA ATATGAAAAA
CATCTAAAGA TGGCATTAGA AAAACCGCCA ACCATTAAAT CACATTCTAA CGTAATAATG
CATATTTTTG GGTATTTTTC AAAAAATTTC AGTCAATTAG AAAAAGAACA ATTTTTCAAA
TTACTAAATG AGTTCAAAGG AGAAGAAATC ACAATTGGAA AAATTCTATC AGAAATAAAT
CCAATCATTT ATCGATTCAA CAACACATAT CTTGCAAATC AGACATATTT TCTACTATAT
TCAGATCCTC AACCAGGAAA TTTGTTTCAC ATGTTGTCTC AAAAATAA
 
Protein sequence
MNKKQEMTGT SRLSEHDIKE YVLERFKEVK KEKIKNLVSF QSMNKYMIMA HNQDELQILG 
NIVAGYKKIS LLDIMTEYEK HLKMALEKPP TIKSHSNVIM HIFGYFSKNF SQLEKEQFFK
LLNEFKGEEI TIGKILSEIN PIIYRFNNTY LANQTYFLLY SDPQPGNLFH MLSQK