Gene Nmar_0934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0934 
Symbol 
ID5773771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp815397 
End bp815813 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content36% 
IMG OID641316573 
Producthypothetical protein 
Protein accessionYP_001582268 
Protein GI161528442 
COG category[R] General function prediction only 
COG ID[COG2522] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.244199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACTTC CTGCTGAGAT TGAATCCAAA ACTCTAATTC CTGCCTTACG TGCAATTCTT 
GCAAAAAAAC TGGCTGAAGA TCATAACATT AGAGAAGATG AGATATCTAA AATGCTTGGA
GTTACACAAG CTGCAGTTAG TAATTACATT CGAGGTACTA GAGGTGACCC TTCTTTAATT
GCAAAACTCT TGGCAGAAAA ACAAGTTGCA GACATGATTG ATGAACTAAG TGATAATCTG
TCATCGGATA TGGCATACAC TCCATCTAGC TTGTCTAAAT TCATTGGATT GTGCAACTAT
ATCAAATCAA GTTTGTTAAT CTGTGAGATA CATCATAACT TGGAATCTGA TATTGATGAG
CAAGTTTGCA AAGAATGTGA AAATATGCTT CTTAAAGGTC CAGGCAGTGT ATACTAG
 
Protein sequence
MLLPAEIESK TLIPALRAIL AKKLAEDHNI REDEISKMLG VTQAAVSNYI RGTRGDPSLI 
AKLLAEKQVA DMIDELSDNL SSDMAYTPSS LSKFIGLCNY IKSSLLICEI HHNLESDIDE
QVCKECENML LKGPGSVY