Gene Nmar_0923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0923 
Symbol 
ID5772959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp808250 
End bp808537 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content38% 
IMG OID641316562 
Product30S ribosomal protein S26e 
Protein accessionYP_001582257 
Protein GI161528431 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG4830] Ribosomal protein S26 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTTA AGCGTGCAAG TAGAGGTCGT ACAAAAGGAG GAAAAGGATC TTCAGGTGTT 
GTACAATGTA CAAACTGCGG ACAAACCGTT CCAAAAGACA AGGCAAAAAA AGTAACATCT
AGACTTAACC TAGTCGAACA TACACTAGCC AAAGAATTAC GAGCACAAGG AGCATACATT
GCATCACCTA CAGTTCTAAA ATGGTATTGT ATTTCATGTG CAATTCACTT TAAGATTCTA
AAAATTAGAT CTGCAGACAA TAGAAGAAAA CGTGGAAAAC TACGATAG
 
Protein sequence
MPLKRASRGR TKGGKGSSGV VQCTNCGQTV PKDKAKKVTS RLNLVEHTLA KELRAQGAYI 
ASPTVLKWYC ISCAIHFKIL KIRSADNRRK RGKLR