| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0920 |
|---|
| Symbol | |
|---|
| ID | 5774658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 804551 |
|---|
| End bp | 806068 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641316559 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001582254 |
|---|
| Protein GI | 161528428 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAT TACCTTTCAT TGTTTTAGGA ATAGGAATTT CTTTTCTTTT AATTTGGGTT
TTTGGAATAA CTCCCGAACT ATTAACTAGT CACGACATCT TAGAAATTAC TGCTGAAAAT
GTTGGAATGA TTCAATTTGC TGACTGTGTT GGATGTGAAC TTTCTGAACC TACAAAAATG
CTATTTCATT GGGATCGAGA AATTCTGGAA GTAAATGGCA ATGCATTATT GTTACGTACT
ACATATGATT ACAAAGATAT CTTAACTGCT GAGAGTTTTT GGGTTACCGA TTTTACTGAG
GCTGTGGATA AAAACACTCG TGAATATTTA GACAAAACTG GTCACTTTGC ATTCCCTCCA
CACGTAGAGA AAAAAGACTA CTTTGTTTAT GATATTGGTG GAGTTGTAAT GCATTATCAT
TTTGTTGAAG AAACTACTCT TGATGGAGTA ACTGTTTACA AATTTGAGGG TGAAGAAATT
TTTGATGTAT CTGATGTTTA TCCTGATTTT TCAGAACAAA TTTGGGAACA TTATAGAGCT
ACAAATCACA TTGAACCTGT AACAGGAATG GATGTTTCAT TTAGTGAACA ATTTACAGAT
TATGCGTTAG TTGATGATCA AAAAATTGTT GTTTTAGATG CATGGGATGA ACCAACAGAA
TTTTCTGAAA AAACATTATT GAAACAAGTA AAGAATCTCA AATCTCTTTA TTTTATGTAT
GAAAATATTA TCCCATCTAT AATTGGTCTT GCTACCTTAG CAGGATTTAT TGTGACAATG
TTAGCTGGTA GAGTTTCAAA AGGTGAGACA AAGATTGCAG AACTAGAAGA AATTGATAAA
CAAAAAGATG AACTTGTTTC TATGGTTAGT CATGAGATAA AAAATCCTTT AACTCCAATC
ATTTTGGCAT GCCAATTATT GCTTACAGAA AAAGAAGGCC CTTTAACTCA AAAACAAAAA
CATAGAATCA AGCAAATTTT GGTAAATTCT AACCAAGTTA CTGCTTTGTT ATCTGATTTG
TCTGATATCA AAACTTTAGA TAGAAATGAT ATGAATTTGC GTAAAGAAGA TGTCAATGTT
GATATTCTAT TGAAAAAAAT TATTCCCAAC CTAAAAGATA TGGTCGAATC ACGAGGGGCT
GTTTTGGAAT TAAAAGTTAA AAAATCTAAA ACAATCTCAT GTGACGCTGC TCGTATCTCT
CAAGTTGTTA CAAACATTGT CAAGAACGCT GTTGACTTTG TTCCAACAAC AAATGGAAAA
ATTGTCATTT CATCTGATGT CACTGATGAT GGCCAGACTT TGATTAGCAT TGAAGATAAC
GGAATAGGGA TTCCTGAGGA ACATCATGAA ACCGTATTTG AGAAATTCCA TCAATTAGAT
ACTCCTAAAG ATATTTCTCA CCAAGGAACT GGCCTTGGAT TGGCCATTTG CAAGGGAATT
GTTGAATCTC ATGGTGGAAA AATCTGGGTT GCAAAAGACT ACACTGGTGG TGCTAAATTC
AATATTCTTT TGCCTTAA
|
|---|
| Protein sequence | MQKLPFIVLG IGISFLLIWV FGITPELLTS HDILEITAEN VGMIQFADCV GCELSEPTKM
LFHWDREILE VNGNALLLRT TYDYKDILTA ESFWVTDFTE AVDKNTREYL DKTGHFAFPP
HVEKKDYFVY DIGGVVMHYH FVEETTLDGV TVYKFEGEEI FDVSDVYPDF SEQIWEHYRA
TNHIEPVTGM DVSFSEQFTD YALVDDQKIV VLDAWDEPTE FSEKTLLKQV KNLKSLYFMY
ENIIPSIIGL ATLAGFIVTM LAGRVSKGET KIAELEEIDK QKDELVSMVS HEIKNPLTPI
ILACQLLLTE KEGPLTQKQK HRIKQILVNS NQVTALLSDL SDIKTLDRND MNLRKEDVNV
DILLKKIIPN LKDMVESRGA VLELKVKKSK TISCDAARIS QVVTNIVKNA VDFVPTTNGK
IVISSDVTDD GQTLISIEDN GIGIPEEHHE TVFEKFHQLD TPKDISHQGT GLGLAICKGI
VESHGGKIWV AKDYTGGAKF NILLP
|
|---|
| |