| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0888 |
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| Symbol | |
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| ID | 5774377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 778828 |
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| End bp | 780228 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641316527 |
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| Product | helicase c2 |
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| Protein accession | YP_001582222 |
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| Protein GI | 161528396 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCTG AAAAAGTAGA CAATTCTAGA AGAGCTATGA GATGGGGACT AACCTGTGAA
AAAGGAGAAT GTATTGAAAG AACCAGTAAA AACGGTAAAG AAGTAATTGA AACCTGCAAA
TTCAAACCTA CAATAAAACA AGTTGAAGAA AACACTCAGG ATTCCCAGTC ATGTCATTAT
TATCTTCAAA AATATGAGGC ACTAGTCTCC AAACACTCTC TTTGGAATTA TCATGCATTT
TTTCAAATTA TGAAATTTAA CAAGAAACTG TTTGAAGATT ATTTGGATAG AAAGGTCTCT
GTTTTTGATG AGGCTCATAA AATTGAAGAT CAAATTATTC AGTTTGTAGG ATTTGATATC
TTTGCTGGAC AAGTTGATGA ATGTAATCTT AATGCAGACA AGTATGATTT TGCTGATTTA
GATTCTATGA TATCTTTAAC TGACGACATT GCATATTCTT ATGCAAAAAA AATCAAAGAT
ATCAAAGAAA GTCCTGGTTT TGAAAATGAT CCTGATTATG AATTGATATC AAGATTAGAA
AGAAGATATG ATAGAGCGGC ACAGGCAAAA ATCGACATTT CTTCAGACAA AAATAATTTT
GTTGTAAATG ATCCTGTACG TGATTTGAAT GGAAATTTTC GAACTATTTC TGTAAAACCA
ATTGATGTAT CAAAATTTGC AAACGAGTTT TTTGAAACAG AATATCAAAT TTTCATGTCT
GCTACAATTG ACAAACAAAG TTTTTGTGAA AATATGGGTT TGAAAAAAGA TGAAGTTGCA
TTTGTTGACA CTCCAAAATC TCCATTCCCA ATTGAAAACA GAAATGTTGA TCTGTTGAAC
ATTAGGAGAT TAAGTTATGG TTCAACTGAA GAAGATGAGT TAGAAGTAAT CAAAACAATT
GATCGAATAC TAGATGAACA TTCTACTGAA CGTGGGTTAA TTTTGACATC ATCTATTCCA
AGATGTCAAA AAATTCTAAG ATACCTTTCT CCAAAAAACA CTCGTAGAAT CAGAATATGT
CACAGTAAAA ACAAGGATGG TAAAACTCAA GATGAAGTAA TATCAGAACA CGCCTCTGAT
CCTACTGGGG TTTTACTCTC ATCTTCTCTT TGGGAAGGAG TTGATCTAAA AGATGACCTT
TCTCGTTTTC AGATTATTGC AAAGGTTCCC TACCCTAACT ATAAGGAAAA AAGAATCAAG
GCCAAGATGG ACAAATTTCC CCTTTGGTAT ACCTCTCAAA CATTGACAAA ACTACTACAG
GGATTTGGAC GTTCTATTAG GAGTGAGGAT GATTGGGCTA GGACCTATGT TCTTGATGCT
GCTGCAAATA ATGTGTTTTT CAAGGCACAA CAGATGATTC CAAAATCATA CTATGATGTT
CTAGGCATAG AAGACCTGTA G
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| Protein sequence | MASEKVDNSR RAMRWGLTCE KGECIERTSK NGKEVIETCK FKPTIKQVEE NTQDSQSCHY
YLQKYEALVS KHSLWNYHAF FQIMKFNKKL FEDYLDRKVS VFDEAHKIED QIIQFVGFDI
FAGQVDECNL NADKYDFADL DSMISLTDDI AYSYAKKIKD IKESPGFEND PDYELISRLE
RRYDRAAQAK IDISSDKNNF VVNDPVRDLN GNFRTISVKP IDVSKFANEF FETEYQIFMS
ATIDKQSFCE NMGLKKDEVA FVDTPKSPFP IENRNVDLLN IRRLSYGSTE EDELEVIKTI
DRILDEHSTE RGLILTSSIP RCQKILRYLS PKNTRRIRIC HSKNKDGKTQ DEVISEHASD
PTGVLLSSSL WEGVDLKDDL SRFQIIAKVP YPNYKEKRIK AKMDKFPLWY TSQTLTKLLQ
GFGRSIRSED DWARTYVLDA AANNVFFKAQ QMIPKSYYDV LGIEDL
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