| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0882 |
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| Symbol | |
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| ID | 5774612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 773772 |
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| End bp | 775052 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641316521 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_001582216 |
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| Protein GI | 161528390 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1503] Peptide chain release factor 1 (eRF1) |
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| TIGRFAM ID | [TIGR00108] peptide chain release factor eRF/aRF, subunit 1
[TIGR03676] peptide chain release factor 1, archaeal and eukaryotic forms |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.558745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAAA TTGACATAGA AAAACAAGAT TCGGTTAAAG TCTATAAAAT TAGAAAAACA
TTAGAAGAAT TATCAAAAAA ATCTGGTCGC GGTACAGAAT TAATCACAGT ATACATTCCA
AAAGGAAAAC AACTTCACGA AATTATTGGT ACACTTCAAC AAGAACAAGG TACTGCCGAT
AACATCAAAT CAGATCTAAC TAGGTCCCAT GTTGTAGATT CATTAGGAAA AGTTGTTCAA
AGATTAAAGC TATACAAAAA AACTCCTGAA AGAGGATTGG TAATGTTTTG TGGAGCATTG
CCTCCAGAAG AAGGGGGGCC TTTAGGAAGT GAAGTAGTAA AGGTTTGGGA GATAGATCCT
CCTAAAGATT TGAATCAATA TCTGTACAGA TGTGATGATC ATTTCCATGT AGACATTCTA
AAAGATATGC TCAAAGATGA CAACCTAATT GGATTCTTGG CAATTGACTC AAAGGATGCA
GGATGGGGAT TGTTACATGG AGACAAAATC GAAGTTCTAG CTCAAACTGG TTCAGGTGTT
GCAGGAAAAC ACAGACAAGG AGGACAGTCT GCAAAAAGAT TCCAAAAACT CAGAGAGATG
GAGTTGACAT ATTACTTTAA CAGAGTTGCT CAAACAACAA GAGAATACTT TATTGACATT
TATCCAGTAA AGGGATTAGT TATTTCAGGT CCAGGACCAA CAAAAGAAGA TTTCATTAAC
GGAAATTATC TAGAATACAG ATTACAAAAC AATATCATTG CAACAATTGA CTCATCATAT
TCTGGCTCAG AAGGAATACG AGAAGCATTT GCAAAATCTT CAGACATTTT AGGCAACTTT
AGACTTGTAG AAGAAAAGAA GCTTGTGGAA GCATTATTCA GAGAGATTAA CGGAAACACT
GGAAAAGGAT CATATGGATT GCAAGAAGTA ATAGATTTTC TAAAAAACAA TGTAGTTGAA
ACGTTGATCA TTACAGATAA CACAAATTTG AACAGGGTTG AAGGTATATG TAAAAGATGT
AAACATCTTC AAGAAGACAT TGTTGAAAGA CCAGACGTAA TTCCAAAGAA AACAGAGTAC
AGCAGCAAGC CATGTCCAGG ATGTAACGCT ATGGAAGTTG AAGTAAATGA GCAAGACATT
GTAGATTATT TAGAATTGAT AGCATCAAAG ACAGGTTCGC AGTTAGAGGT AGTATCAGGT
AGTGCAGAAC ATGGAAACAT GTTAGCAAGT CTTGGAAAGA TTGGTGCGAT TTTAAGATAC
AATCCAGGCC ATTCTAAATA G
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| Protein sequence | MGKIDIEKQD SVKVYKIRKT LEELSKKSGR GTELITVYIP KGKQLHEIIG TLQQEQGTAD
NIKSDLTRSH VVDSLGKVVQ RLKLYKKTPE RGLVMFCGAL PPEEGGPLGS EVVKVWEIDP
PKDLNQYLYR CDDHFHVDIL KDMLKDDNLI GFLAIDSKDA GWGLLHGDKI EVLAQTGSGV
AGKHRQGGQS AKRFQKLREM ELTYYFNRVA QTTREYFIDI YPVKGLVISG PGPTKEDFIN
GNYLEYRLQN NIIATIDSSY SGSEGIREAF AKSSDILGNF RLVEEKKLVE ALFREINGNT
GKGSYGLQEV IDFLKNNVVE TLIITDNTNL NRVEGICKRC KHLQEDIVER PDVIPKKTEY
SSKPCPGCNA MEVEVNEQDI VDYLELIASK TGSQLEVVSG SAEHGNMLAS LGKIGAILRY
NPGHSK
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