Gene Nmar_0810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0810 
Symbol 
ID5773848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp715541 
End bp716353 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content33% 
IMG OID641316448 
Producthypothetical protein 
Protein accessionYP_001582144 
Protein GI161528318 
COG category[S] Function unknown 
COG ID[COG2106] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.471857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATTAT CTGTTGCAAT TCCAGAATCT TCACTATCAG ATGAATCATT AAAGATAGAC 
AAGACTAGAA AAATTTCAGT TCTAGCAAGA GCATGTGCAA TTTTCAAAAT TGAGACAATC
TATGTCTACC AAGAAGGAAA CAACAAACAA GATGGAAATC TCATGGTAAT GATTCTGAAA
TATTTAGAAA CTCCACAATT TTTGAGACGA AGATTATTTT CAAAAGTAAA TGATTTGAAG
TTTGCAGGAG TTTTACAACC ACTGAGAATA CCAAGTCACG CTACACCAGC AAATCCAAAG
AAGATAAACA AAGGAGATGT AAGAGAGGGA ATAGTAGTAA GTGTCAAAGG AAAACGATTT
GTTGATGTTG GAATCAACCA ATTGATTCCA TTTTTTGGCA AAACACTAAT GGGAAAAAGA
GTGACAGTAC AATTCAAGGA AGGACATCCA AACTTTTCAA TTAAAGAAAT CAACAGAAAT
GAAGCACCCG ATTATTGGGG ATATACCGTC AAAGAACGTT CAAACCTGTT TTCATTGTTA
TCAGAATGGA AAGGGAACAT AATTCTTACA TCAAGAAAGG GTAAAACTGC AACAAAAGAA
CAAATTGCAA AATATACAAA GTCAGATCAG CCAACACTTG TAGTATTTGG TTCTCCTGAG
AAAGGAATTC ATGAAATTCT AGGTGGAAAG ATGAAAAATG TACAAAATGC AAAGTCACTA
AACTTTTTTC CAAACCAAGC TACACAAACA GTACGACTAG AAGAAGCATT ACTTGGAACA
TTATCAATAA TTAATGCACA AAGTGTATCA TAA
 
Protein sequence
MKLSVAIPES SLSDESLKID KTRKISVLAR ACAIFKIETI YVYQEGNNKQ DGNLMVMILK 
YLETPQFLRR RLFSKVNDLK FAGVLQPLRI PSHATPANPK KINKGDVREG IVVSVKGKRF
VDVGINQLIP FFGKTLMGKR VTVQFKEGHP NFSIKEINRN EAPDYWGYTV KERSNLFSLL
SEWKGNIILT SRKGKTATKE QIAKYTKSDQ PTLVVFGSPE KGIHEILGGK MKNVQNAKSL
NFFPNQATQT VRLEEALLGT LSIINAQSVS