| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0774 |
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| Symbol | |
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| ID | 5773597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 692953 |
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| End bp | 693744 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641316411 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_001582108 |
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| Protein GI | 161528282 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0166935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGAGT TGGATGGCAT CAATCAGCAT TTTGAGGAAT TAAGAAAGAG ATTACTAAGA
ATTGTCTTAG TGATTGGAGT AATCACAGCA TTCATTCTAA CATTCCATGC TGAACCAATT
CAAGTGGGCC AAACCACACT GTACTATCCA ACACCTGAAC CACTAAACAA CATTGCAGCT
CAAATCACAA ATCACATGAA AGTGAATTTG GTACCAGAAG ATGTTCAGTT AATTCAAACA
GCTCCAGGTC AAGCATTCTT TGCTCAAGTT TACATTGCAG CACTAGTTGG AATTGTAGTT
GGGATGCCAG TAATCATCAA AGAATTAGTT GGATTCATCA AACCAGCTCT CAAAGAAAAT
GAAATCAATG TTAGTCGTAG TATTACAATT CCAGCACTAG GGTTGTTCAT TACAGGGTGT
GCATTCTCTT ACAATCTAGT AATCCCATAC ATCTTAGAAT TTTTGTACAG ATATGGTGAA
TCTGCAGGGC TGGTCACATT TCTTAATGTG ATAGAATTTG TCACATTCGT ATTACAATTT
TTGTTAGCAT TTGGATTTTC ATTTCAACTT CCTCTTGTAA TGTATGCAAT ATCTGCATCA
GGCATGGTTG ATGCAGATTT TTGGCGAAAA AACATCAGAT ATGCAATTGT CATAATTGTG
ATCTTTGGCG CAATTATTAC TCCTGATGGC AGTGGTGTAA CTATGTGGTT TATTGCAGGA
CCTATGATTG CATTGTATGT TACAGGCATG ATGCTCATTG AGCGTAAAGA ACGCAAAAAG
TTGAACACTT AA
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| Protein sequence | MSELDGINQH FEELRKRLLR IVLVIGVITA FILTFHAEPI QVGQTTLYYP TPEPLNNIAA
QITNHMKVNL VPEDVQLIQT APGQAFFAQV YIAALVGIVV GMPVIIKELV GFIKPALKEN
EINVSRSITI PALGLFITGC AFSYNLVIPY ILEFLYRYGE SAGLVTFLNV IEFVTFVLQF
LLAFGFSFQL PLVMYAISAS GMVDADFWRK NIRYAIVIIV IFGAIITPDG SGVTMWFIAG
PMIALYVTGM MLIERKERKK LNT
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