| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0734 |
|---|
| Symbol | |
|---|
| ID | 5773554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 666166 |
|---|
| End bp | 667611 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 641316371 |
|---|
| Product | FAD linked oxidase domain-containing protein |
|---|
| Protein accession | YP_001582068 |
|---|
| Protein GI | 161528242 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.667409 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCAG TAGAAACACA ACTAAAAAAA ATCATCAGGG GAAAAGTTCA TTCAGAAACA
GAATTTAGGA AATTTTATTC TGTGGATGCT AGTTCGTATC AAATATTTCC AAAAACAATA
GTTATTCCAA AAAATGAAAA GGATGTAATA AACACAATAA AAATTGCAAA AAAATACAAA
ACCAATGTGA CTGTACGTGG TGCAGGTACA GGTTTAGTTG GAAGTGCGTT AAATAATGGA
ATCATTTTAG ATATGAAAAA TTTTGATTCA ATCAAAATAA AGAAAAATTA TGCAATAGTT
GGAACAGGGG TAGTAAAAGG AAAATTAGAT GAAAAATTAG AGAGATATAG AAAATTTTTT
CCACCAAATC CTTCAGTAGG ATCATTTTGT TCAATTGGAG GAATGTTAGG AAATAATTCC
AGTGGAAGTA GAAGTTTAAA GTATGGAAGT ATGATTGACA ATGTATTAGA AGTAACAATT
ATTGATGGCA ATGAAAAAAA AATTGTTCTC CCAAAAGATG AAAAATTATC CAATAAAATT
CAAAAGAAAA TAAAAATTGA TGAAAAGAAA ATTCCAAAAG TATCTAAAAA TTCTTCAGGA
TACAGAATAG ATAAAATTAT TTCAAATAAA GATAGTCACA AAATCATTGT TGGTTCTGAA
GGAACATTAG GAATTATAAT ATCAGCAAAA TTAAAAATAA AAAATATACC AAAAAAAAGA
ATTCTTTTTG TTGTAGAGTA TAACTCAATT AAAAATGCAA TAAATGATTG CTTGACAATA
AACAAAACAA ATCCATCTGC TATGGAATTT GTTGATAAAA TAACATTACA ACAAATTAAT
CATAAATTTC ATAAAAATAC AAAATGTTTA CTTTTTGTAG AATATGATGA AAAAATTAGT
CAAAATATGA AAAAATTCAA AATGATAATT TCAGGAAATA TTATAAAAAA ACTGACAAAA
AAACAAGACA TCTTCCAATG GTGGAAATAT AGAGATTCAT CGTTATATTA TAGCCTCAAA
AACATAAAAA AAGAAAATAG AATCCCCCAC GTAATTGAAG ATGCAGCAGT ACCAATAGAA
AAGTTACCAG AATTATTCGA CATACTAGAT AAGATCAATA AAAAATTCAA AACAAAATCA
GTAATCTATG GCCATATTGG AAATGGGAAT CTTCATGTAA GATTAATTGG GAAAAGAAAG
AAAATAACAC AAATTAAAAA TATTGCAAAA CAATACTTTG ATGAAATTAT CAATATTGGA
GGGACGATAA CTGCAGAACA TGGAGATGGT TTAGCACGTT CAGAATTTAT CAAAAAACAA
TATGGAAAAA TTAACTTTGA GACATTTCAA AAAATAAAAA ACCAATTTGA CCCAAACAAC
GTATTAAATC CAGGAAAAAT AATTAGTGAA AAAAGTACAA TAATCAAAAA TTTTGAAAAA
TTGTAA
|
|---|
| Protein sequence | MNSVETQLKK IIRGKVHSET EFRKFYSVDA SSYQIFPKTI VIPKNEKDVI NTIKIAKKYK
TNVTVRGAGT GLVGSALNNG IILDMKNFDS IKIKKNYAIV GTGVVKGKLD EKLERYRKFF
PPNPSVGSFC SIGGMLGNNS SGSRSLKYGS MIDNVLEVTI IDGNEKKIVL PKDEKLSNKI
QKKIKIDEKK IPKVSKNSSG YRIDKIISNK DSHKIIVGSE GTLGIIISAK LKIKNIPKKR
ILFVVEYNSI KNAINDCLTI NKTNPSAMEF VDKITLQQIN HKFHKNTKCL LFVEYDEKIS
QNMKKFKMII SGNIIKKLTK KQDIFQWWKY RDSSLYYSLK NIKKENRIPH VIEDAAVPIE
KLPELFDILD KINKKFKTKS VIYGHIGNGN LHVRLIGKRK KITQIKNIAK QYFDEIINIG
GTITAEHGDG LARSEFIKKQ YGKINFETFQ KIKNQFDPNN VLNPGKIISE KSTIIKNFEK
L
|
|---|
| |