Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0680 |
Symbol | |
ID | 5773712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 619556 |
End bp | 620353 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641316316 |
Product | rhodanese domain-containing protein |
Protein accession | YP_001582014 |
Protein GI | 161528188 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2897] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACAGAAT CTGGTAACAT CACAACGGAT GTAGATTCTT TACGTTCAGA GATAAGAGAC AAAAGTGTTA GAGTAATTGA TGTAAGGCGA GAAGATGATT ACAAAAAGGA TCATATTTCT ACTGCAGTAA ATCTACCTTT AGCAAATCTT TTGTCTGATG ATAGTCCTGA ACGTGTTGTA AAATTAGTAA ACTCAATGGG AATTGATGAT GAAACTCGTG TTGTAGTTTA TGATGATACC TTTGGAGCAT TAGCATCTAG AGTTGCATGG ACTTTGGAAT ACCTTGGACA TTCAGATGTA AGTTTGCTTG AAACTACCTA TAGTAACTGG AAATCCCTTG GTTTAGAAAG CGATTCTGAC ACACCTGATA TTCAAAGTAA AGAACATTCT ATGAATCTTC AATCTGATAT TTTGGCTACT TCTGATTATT TGGAATCTGC AAAAGAACGT GATGATGTTA TTCTAATTGA TAATAGGGAG AGATTGAACT TCCTTGAACA ACACATTCCT GGTGCAATTA GTCTTCCATA CAGAACACTT GCATCAAATG ACAAAATCTT ACGTCCAAAA GAGGACATGA AACGCTTACT CGATAATCGT GGTGTATCTG GAAATACTGA AATCATTACT TATTGTGGAA GTGTAGGAAC TCTTTCTGGA TTGGCATATT ATGCACTCAA AACTGCAGGC TTGCCAAACG CAAAACTATA CGTTCGTTCT TTCAAAGAAT GGAAAAATCT TCAAAAACCT ACTGCAAAAC AAGAAGATGC AAACTATTGG GACCTATCTG CTGAATAG
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Protein sequence | MTESGNITTD VDSLRSEIRD KSVRVIDVRR EDDYKKDHIS TAVNLPLANL LSDDSPERVV KLVNSMGIDD ETRVVVYDDT FGALASRVAW TLEYLGHSDV SLLETTYSNW KSLGLESDSD TPDIQSKEHS MNLQSDILAT SDYLESAKER DDVILIDNRE RLNFLEQHIP GAISLPYRTL ASNDKILRPK EDMKRLLDNR GVSGNTEIIT YCGSVGTLSG LAYYALKTAG LPNAKLYVRS FKEWKNLQKP TAKQEDANYW DLSAE
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