Gene Nmar_0674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0674 
Symbol 
ID5774236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp614254 
End bp614685 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content31% 
IMG OID641316310 
ProductUspA domain-containing protein 
Protein accessionYP_001582008 
Protein GI161528182 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATAA AAACAAAAAA AATCTTAGTT CCTCTAGATG GTTCTAAAAA CTCAATTCGT 
GGTTTAGATA TGGCCATTCA TTTAGCAAGA CAATCTCAGG GTGTAATCGT TGGATTATCT
GTAAAATCTG TGCCTGGAAT TTATGCTATT CACCCTTTAG GTTTTTTAGA TTTTAATACT
TCAAAAGAAA TGAAACAAAT CCTTGATGAT GCAAAATTAC GCGCAGCAAA AAAAGGAATT
AAATTAATTT CAAAAAAATT ATCTGGTGAT CCTGGATATG ATATTGCTAG ATTTACAAAT
AATAAAAAAA ATGGAATTGA TTTAGTAGTT ATCGGTGCTC GTGGAAGAAG TTCTGCAAAA
GAGCTTTTTT TGGGCAGTGT TTCAAATTAT GTGTTACATA AATCCAAAAA ACCGGTACTT
GTTGTGAAAT GA
 
Protein sequence
MVIKTKKILV PLDGSKNSIR GLDMAIHLAR QSQGVIVGLS VKSVPGIYAI HPLGFLDFNT 
SKEMKQILDD AKLRAAKKGI KLISKKLSGD PGYDIARFTN NKKNGIDLVV IGARGRSSAK
ELFLGSVSNY VLHKSKKPVL VVK