Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0674 |
Symbol | |
ID | 5774236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 614254 |
End bp | 614685 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641316310 |
Product | UspA domain-containing protein |
Protein accession | YP_001582008 |
Protein GI | 161528182 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGATAA AAACAAAAAA AATCTTAGTT CCTCTAGATG GTTCTAAAAA CTCAATTCGT GGTTTAGATA TGGCCATTCA TTTAGCAAGA CAATCTCAGG GTGTAATCGT TGGATTATCT GTAAAATCTG TGCCTGGAAT TTATGCTATT CACCCTTTAG GTTTTTTAGA TTTTAATACT TCAAAAGAAA TGAAACAAAT CCTTGATGAT GCAAAATTAC GCGCAGCAAA AAAAGGAATT AAATTAATTT CAAAAAAATT ATCTGGTGAT CCTGGATATG ATATTGCTAG ATTTACAAAT AATAAAAAAA ATGGAATTGA TTTAGTAGTT ATCGGTGCTC GTGGAAGAAG TTCTGCAAAA GAGCTTTTTT TGGGCAGTGT TTCAAATTAT GTGTTACATA AATCCAAAAA ACCGGTACTT GTTGTGAAAT GA
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Protein sequence | MVIKTKKILV PLDGSKNSIR GLDMAIHLAR QSQGVIVGLS VKSVPGIYAI HPLGFLDFNT SKEMKQILDD AKLRAAKKGI KLISKKLSGD PGYDIARFTN NKKNGIDLVV IGARGRSSAK ELFLGSVSNY VLHKSKKPVL VVK
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