Gene Nmar_0646 details

Gene Information

• Locus tag: Nmar_0646
• ID: 5773723
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: -
• Start bp: 583735
• End bp: 584355
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 641316282
• Product: lysine exporter protein LysE/YggA
• Protein accession: YP_001581980
• Protein GI: 161528154
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 35
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAACAAT TCTTTGAATT TGCAGTACTA GTAATAGTCA TCTCTGCATC AGGAGTAATG 
GCACCAGGGC CTCTTTTTGC AGCAAACATA TCATATGGAT TAAGAGAAGG TGCAAAATCA 
GGCGTTAAAA TGGCTACAGG CCATGCAATT GTAGAATTAC CATTAGTGAT ATTGTTAGGA 
ATTGGTGTTT TTTCATTAGA AAGTTTTCCA GAGTTTAGGA CAATCATTTC AATTTTAGGT 
GCAATAACGC TTTTTGTCTT TGCAGCATTA CAAATTAGAA CAGTTCTCAA AGAAAAAGAA 
CTTTCAATTA CAAATCCAAA ACAAGGAGCG TTAATTACAG GAGTTTTGTT AAGTGGACTA 
AATCCATTTT TCATTATTTG GTGGTTAACT ATAGGATTCA AGCTAATTTC AGATGCCATG 
ATGATATGGG CATTTTCAGG CATGCTAATC ATGTTTGGAT TACATATTTG GATGGATTTT 
GCATGGCTTG GAGGAATTTC ATTTTTGGCA TCAAAGAGTG TAAAAATTCT TTCAAACAAA 
AATTACAAAA TATTGATGAT AGGGTTAAGT GGAATGTTGA TTTATTTTGG AATTACGTTT 
TTGCAAGAAA TAAAGTATTA A 

 

Protein sequence

MEQFFEFAVL VIVISASGVM APGPLFAANI SYGLREGAKS GVKMATGHAI VELPLVILLG 
IGVFSLESFP EFRTIISILG AITLFVFAAL QIRTVLKEKE LSITNPKQGA LITGVLLSGL 
NPFFIIWWLT IGFKLISDAM MIWAFSGMLI MFGLHIWMDF AWLGGISFLA SKSVKILSNK 
NYKILMIGLS GMLIYFGITF LQEIKY