Gene Nmar_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0605 
Symbol 
ID5773283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp540147 
End bp541508 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content28% 
IMG OID641316240 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_001581939 
Protein GI161528113 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAAAAG TAAAACCAGG ATACAAACTA GTAAAGTCAC TTTTTGGAAA ATACGAAGAA 
ATTCCTGAAG ATTGGAATTA TGTAATTTTG GACAAATTGA CTCCAAAAAA TGAAAAATCA
TCAATTCGGA TGGGACCTTT TGGAAGTAGT TTAAAGACTC ATGAATTATT GAATTCTGGA
AAAATTAAAA CACTTTGGAT TGAAAATATT GTGAATGATA AGTTTACTTG GAAATATCAA
AAATTCATTA CTGAAGAAAA ATATGAGAAA CTAAAAGGAT TTACTGTAAA ACCAAACGAT
GTTCTAATTA CAATGATGGG AACATTAGGG AAAACAGCAA TTGTCCCTGA AGATATAGGA
AGAGCAATTA TTTCATCCCA TCTTTTAAAA ATTTCTCTAG ATCACGAGAA ACTTCTTCCT
AAGTTCTTGT ATTATTTTTT GAAATCAAAT TTTGTTTATC GTCAGATAAT TAAAGAATCA
AGGGGGTTGG TTATGGGAGG ATTGAATACC GGAATTATCA AAAATCTGTT AATCAAAACT
CCAAAAATTT CTGAACAACA AAAAATTCTT TCCATATTGT CTAATGTTGA TAATCTAATC
TATTCATATG AGAAAATCAT AGATCAAACA AAACATCTCA AGATTGGCTT ACTACAGCAA
CTCCTAACAA AAGGAATCAA ACATAAGAAA TTTAAGAAAG TATTCGACAG ATTTGGAAAT
TATTTTGAAA TTCCTGATTC TTGGGAATAT GTGAAAATCA AAAAATTAGT TGATGAAAAG
AGAATTCTAG AAATTCAAGA TGGAAATCAT GGAGAATTAC ATCCTAAATC TTTAGATTTT
ATTCAAAAAG GAATTCCGTT TGTTACAGCA GATTGTTTGA TGAACGATAA CATTAACTAT
GATTTATGTA AATTCCTACC TGAAAAATTT CTAAAAATAC TAAGAATCGG ATTTGCCAAA
CAAAAAGATG TTTTACTGTC TCATAAAGGA AGTGTTGGAA ATGTGGCAGT TGTTGGAAAT
AAATTTGATA GAATTATTCT TTCACCTCAA ACAACTTACT ATCGATTATC CAGTAAAATT
ATTCCTAAAT TTCTATATTA TATTTTTCAA AGTTTTGATT TTCAAAAACA ACTAAAATCG
TTAGCAAAAC AATCTACACG AGATTACATA GGAATAACAA ATCAACAAAA TCTGTTAATT
CCATACATAT CTTCAATAGA AGAACAAGAA AAAATCATTT CAGTACTTTC TGATGTTGAT
TCTAACATAT CAAATCTTGA ATTAAAAAAG AAATCTCTAG AATCTCTCAA AAAAGGACTA
ATGCAGAAAC TTTTGACAGG CAAAATCAGA GTCAAAGTTT AG
 
Protein sequence
MAKVKPGYKL VKSLFGKYEE IPEDWNYVIL DKLTPKNEKS SIRMGPFGSS LKTHELLNSG 
KIKTLWIENI VNDKFTWKYQ KFITEEKYEK LKGFTVKPND VLITMMGTLG KTAIVPEDIG
RAIISSHLLK ISLDHEKLLP KFLYYFLKSN FVYRQIIKES RGLVMGGLNT GIIKNLLIKT
PKISEQQKIL SILSNVDNLI YSYEKIIDQT KHLKIGLLQQ LLTKGIKHKK FKKVFDRFGN
YFEIPDSWEY VKIKKLVDEK RILEIQDGNH GELHPKSLDF IQKGIPFVTA DCLMNDNINY
DLCKFLPEKF LKILRIGFAK QKDVLLSHKG SVGNVAVVGN KFDRIILSPQ TTYYRLSSKI
IPKFLYYIFQ SFDFQKQLKS LAKQSTRDYI GITNQQNLLI PYISSIEEQE KIISVLSDVD
SNISNLELKK KSLESLKKGL MQKLLTGKIR VKV