Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0572 |
Symbol | |
ID | 5773316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 508749 |
End bp | 510014 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641316206 |
Product | hypothetical protein |
Protein accession | YP_001581906 |
Protein GI | 161528080 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTCAA AACTTTCTCA TTTTTCAAAA ACAGCAGGAC CTGGAATTTT ATTTGCTTGT ACTGCCATAG GCGTCTCACA CTTAATCCAG TCGACTCGTG CTGGCGCTGA TTTTGGTTTA ATGATCTTGG GGTTTGTTGT GCTTGCAACT GTGCTCAAAT ATCCTTTCTT TGAGTTTGGT TCTCGTTATG CAAACTCTAC TCAAACAAGT ATCATTGATG GATACAAAAA ACTTGGAAAG CCAGCACTGT GGATGTATTT TATAATCACA ATCTGTTCAA TGTTTTTTGT AACTGGTGCA GTAGGATTTG TAACTGCTGG ATTTTTCGAG AATTTGTTTG GAATTGATTT TCTTGAAGAG TTCACTGTAG TTATTTTATT TGCAATTTGT GTTGGGATTC TAGCTGTTGG AAAATACAAC GTTCTTGATA GTTTGATTAA GATTATTGCA ATTGTTTTAC TTGTCTCAAC TGTTTCAGCC TTTTTGTTAG CATTGTATAA TGGTCCAATA GAAGAGGTTT CTGGATTTGC TCCAAAAGAA CTTTGGAATT TGACTGGAAT CTTTTTCTTA TTAGCATTAA TGGGTTGGAT GCCTGCTCCT CTTGATCTTT CTAGCTGGAA TAGTTTATGG ACACTTGAAA GATCAAAACA AACTAGTTAT CGACCAAAAT TAAAAGAAAC ACTGTTAGAA TTCAGATTGG CTTATCTGAT AACTGGTATC TTGGCAGTCA TGTTTGTTGT ATTAGGTACT TTCATTTTCT ATGGTTCAGG TGAAGAATTA CCAAACAGTA ATTCTAGTTT TGCTCACAAA GTTGTAACAT TGTATACTCA GACTATTGGT GAGTGGAGTT ATGTCGTTAT TGCAGCTTCT GCATTTTCTG TAATGTTTGG AACCATAATT GCGTTGTTTG ATGGGTATTC TCGTTCCTTA CAAAGAACTG TAGAATTGAT TTTTTCTAAA AAAGAAGAGG CAATACGTAC AAAATTCAAG ACATTTTATG TTATTTTTCT GATCGTTCTG TCGGTTGGCT CATTGATTGT GATTTTCCAA TTTGCAGGAA ATCTAAAAGA ATTAGTCGAT TTTGCTACCG TTTTGTCTTT TGTAGTCGCG CCAGTTATTG CGATATTTAA TTTCAGATTG GTTACTGGAA AGTATCTTCC AAAAGAATCT CAACCTTCAA CTCTGTTGAG AATTTTGAGT TTTGCAGGAA TTGTATTCCT TAGTGGATTT GCAATATTCT TCTTGGCAAT GAAATTCTTA TCATAA
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Protein sequence | MGSKLSHFSK TAGPGILFAC TAIGVSHLIQ STRAGADFGL MILGFVVLAT VLKYPFFEFG SRYANSTQTS IIDGYKKLGK PALWMYFIIT ICSMFFVTGA VGFVTAGFFE NLFGIDFLEE FTVVILFAIC VGILAVGKYN VLDSLIKIIA IVLLVSTVSA FLLALYNGPI EEVSGFAPKE LWNLTGIFFL LALMGWMPAP LDLSSWNSLW TLERSKQTSY RPKLKETLLE FRLAYLITGI LAVMFVVLGT FIFYGSGEEL PNSNSSFAHK VVTLYTQTIG EWSYVVIAAS AFSVMFGTII ALFDGYSRSL QRTVELIFSK KEEAIRTKFK TFYVIFLIVL SVGSLIVIFQ FAGNLKELVD FATVLSFVVA PVIAIFNFRL VTGKYLPKES QPSTLLRILS FAGIVFLSGF AIFFLAMKFL S
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