| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0542 |
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| Symbol | |
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| ID | 5773616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 480908 |
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| End bp | 482206 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 641316175 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_001581876 |
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| Protein GI | 161528050 |
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| COG category | [H] Coenzyme transport and metabolism
[S] Function unknown |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
[COG1992] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTC TTTCTATTGG CGGTTCTGAT CCGTCATCAG GAGCAGGAAT TCAAAGCGAC
ATCAGAGTGT TTTCAGCATT AGGAGTACAT ACATTAACTG TAATAACAGC AATTACAAGT
CAGAATACTT CAAAATTTGG AATGGTTGAG CCAGTTTCAT CTAAAATATT ACAAAAACAA
TTAGAATCAG TATTTTCAGA TTTCAAAATT AATGGAGTTA AAATTGGAAT GGTATACAAT
TCAAAAATTA TCAAAATAAT ACACCAACAA TTAAAAAAAT TAAAAATTCC AATTGTAGTT
GATCCAGTAA TAAGATCAAC CACCGGAGGA AGTTTAATAG AAAATAATGC AAGGAAAGAT
TTTCAAAAAT ACATCGTTCC ACTTGCAACA ATAATTACAC CAAACAAAAA AGAAGCAGAG
TTACTTACAA AAATGAAAAT TTCAACAAAA AACACGCCTG AAAAAGTGGC AAAAGAGATT
CAAAATATGG GAGCAAAAAA TGTCACAATT ACAGGAATTG AAGAAAAAAA GAAAGTGTCA
GATTTTGTTC TAGAAAAAAA TTCAAAATAT ATCATTTCAG GTGAAAAAAT CCCAAAAATT
AATCACGGCA GTGGATGCAT CCACTCAGCT GCAGTAGTGT ATTCACTTGC AAAAAAGAAA
AGTATCAAAG AATCACTATA TTTTGCAAAG AAATTCACAT ACAAGTCAAT AAAAAATGCA
AAAAAAATTG GAAAGGGTAT TGCCATTACT GATATACAAA GTAAAAATAA GATTGAAGAT
GAATTATCAT CAGCAATAAC CAAATTTATA AAATTAAAAG GAATTTACAA AAATATTCCA
GAGTGCCAAA CAAATTTTGT ATTCTCAAAA CAAAGACCAA AATCTACAAA AGATGTTTTG
GGGATTTCAG GAAGAATTGT AAAAGCTGGA ACAAACGTTC TTGTTGCAGG GGATTTAAAG
TATGGAGGTT CAAAACATGT GGCAACTGCA TTGTTATCAA TGAATAAAAA ATATCCAGGA
ATTTGTTCTG CAATTAATTT AAAATATCAA AGTACAACAT TATCAAAAAT TAAAAAATCA
AAGTTAGAAG TTAGCAGTTA TGATCGTAGT AAAGAACCAA AACATGTTAA AATTAAAGGT
TCTACGATTA GATGGGGAAT AAATTCTGCA ATAAAAAATT CGAAAAAAAT CCCGGATGTG
ATTTTTCATA AAGGGGATTT TGGAAAAGAG CCAATGATTA TTGTTTTTGG TAAAACTCCA
GAAAATGTTT TAGAAAAAAT ATTAAAAATT AAAGGTTAA
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| Protein sequence | MNILSIGGSD PSSGAGIQSD IRVFSALGVH TLTVITAITS QNTSKFGMVE PVSSKILQKQ
LESVFSDFKI NGVKIGMVYN SKIIKIIHQQ LKKLKIPIVV DPVIRSTTGG SLIENNARKD
FQKYIVPLAT IITPNKKEAE LLTKMKISTK NTPEKVAKEI QNMGAKNVTI TGIEEKKKVS
DFVLEKNSKY IISGEKIPKI NHGSGCIHSA AVVYSLAKKK SIKESLYFAK KFTYKSIKNA
KKIGKGIAIT DIQSKNKIED ELSSAITKFI KLKGIYKNIP ECQTNFVFSK QRPKSTKDVL
GISGRIVKAG TNVLVAGDLK YGGSKHVATA LLSMNKKYPG ICSAINLKYQ STTLSKIKKS
KLEVSSYDRS KEPKHVKIKG STIRWGINSA IKNSKKIPDV IFHKGDFGKE PMIIVFGKTP
ENVLEKILKI KG
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