Gene Nmar_0529 details

Gene Information

• Locus tag: Nmar_0529
• ID: 5773063
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 470881
• End bp: 471291
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 641316162
• Product: translation initiation factor eIF-5A
• Protein accession: YP_001581863
• Protein GI: 161528037
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
• TIGRFAM ID: [TIGR00037] translation initiation factor eIF-5A

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 46
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCAAAC CTTCTGATCT TGGTTCATTA AAAATCGGTT CTTACATTCT ATTGCCACAT 
TCAGATCAAC CAAGTGGTGA ACCTTGTAGA ATTGTTGAAT ATGATACTTC AAAACCAGGA 
AAACATGGTG CAGCAAAAGC AAGAATTGTT GCTGAAGGAA TTTTTGATGG TCAAAAAAGA 
CCTCATGTAG GACCTGTCAG TATGCAAATT CATGTTCCTA TGATTAACAA AAAAGTAGGA 
CAGATTATCT CTATGACTGG TGACACCGTT CAGTTGATGG ATTCTGAAAC TTTTGAAACA 
ATCGATGTTA CATTGATTGA TGATGAAGTT CAAGGAAAAT TGGAAAACGG ACAAAATGTA 
GAATACTGGG TTGTAATGGA TAAAACTAAA ATCATGCGCA TTAAGACATA G 

 

Protein sequence

MSKPSDLGSL KIGSYILLPH SDQPSGEPCR IVEYDTSKPG KHGAAKARIV AEGIFDGQKR 
PHVGPVSMQI HVPMINKKVG QIISMTGDTV QLMDSETFET IDVTLIDDEV QGKLENGQNV 
EYWVVMDKTK IMRIKT