Gene Nmar_0506 details

Gene Information

• Locus tag: Nmar_0506
• ID: 5773057
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 454758
• End bp: 455378
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 641316139
• Product: SNARE associated Golgi protein
• Protein accession: YP_001581840
• Protein GI: 161528014

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 52
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGTAGATA TTTTCGAATT TTTTGCAGAA TTTTCCTATT TTGGAATTTT TCTTGTGCTG 
ATTCTCGTAA ATGCATCTCC AATTTTGATG CCTCCAAGCT GGATTGTTTT AACATCATTT 
TATCTTCTTG ATCCTAGTCT GAATATTGTA TTTCTTGCAA TGGTTGGTGC TACTGGTGCT 
ACCATCGGTA GATTTTTTCT CAAAAAGATC AGTGGATTAT TTAGAAAATT TGTTGGAGAA 
GAACAAAAAT CCAATCTTGA CATAATTGGT GATTATCTTA ATCACAAAAA ATATGGTTAT 
CTCCTTGCAT CGTTCCTCTT TGGTGCAACA CCTCTACCAA GCAATATGTT ATTCATCACA 
TACGGGTTAA TGCGTGCAAA AAGTATTGGA ATCTATATTG GATTTTGGTT TGGTAGAACT 
ATTTCTTACA TCATAATGAT TTATTTTGGC AATGCCGTTT TGCAACCATT CTTAGAAATC 
TTTGAAGACC GTCTAACTGG AATCTTACTA ATTGATGGTG TGGGAATTGG AGTGATTGTT 
CTCTTTGCGT CTATTAATTG GACAGTATTA ATTACTCAGA GAAAAATTAA ATTCGTTAAA 
CCAAAAATAT GGAGATTCTA A 

 

Protein sequence

MVDIFEFFAE FSYFGIFLVL ILVNASPILM PPSWIVLTSF YLLDPSLNIV FLAMVGATGA 
TIGRFFLKKI SGLFRKFVGE EQKSNLDIIG DYLNHKKYGY LLASFLFGAT PLPSNMLFIT 
YGLMRAKSIG IYIGFWFGRT ISYIIMIYFG NAVLQPFLEI FEDRLTGILL IDGVGIGVIV 
LFASINWTVL ITQRKIKFVK PKIWRF