Gene Nmar_0472 details

Gene Information

• Locus tag: Nmar_0472
• ID: 5773658
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 425604
• End bp: 426323
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 641316104
• Product: ArsR family transcriptional regulator
• Protein accession: YP_001581806
• Protein GI: 161527980

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 0.0123472
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCTGCTG AAAATCCAGA TGACGTACTA ACTGAAAAAA TCAAAATTCT AGCCACCGAT 
GATGAGAAAA TAAAGTCATT TGGAGAGCTT TTTACGAATG ATTCTAGTCG TGAAATCTTA 
CAGTTATTGT TCAACGAAGA GATGACTGCA AATCAGATTG CACAAAAGAC AGACATCTCA 
CTTCAACTAG TAAAATACCA TCTCAACAAA TTGCAGGATT TAGGAGTTGT AAAGATTTCA 
AAAGTTGAAA AGAATTCAAA ATCTCAAGAC ATGAAAGTTT ACTCTGCAAC AAAATTCAGT 
ATTGTCATCG TTCCTCCAAA ACTGTCTGAA AAAACTAAAG AAAGCAAACT TTTGGTTCGT 
TCATTTAGAC ATATCTACAA AGTTGCAGGA CTTGCTATTG CAACCGGCAT TTCAGGGATG 
TTCTCTTTAT CTCAAATTCA AAACAAACCC ATTCCAGTTC AAAGTGCAAG ACAATTTGCA 
GCAGTTAAAG AACCATCAAT GCGTATGGAA TCATTTGACG AATCTGCAGA ATCCTTTGTT 
ACATCTGCTC CTAATCTTAA TACTGAATCT GAAGATCTTT CAGCAGGTAT GGAAATTACT 
GAAAAAGCAA TTGATTCAGG TGTTTCTGGA ATTGATTTGT CTATACCTTT TGTAATAATT 
ACAATAATCT TGGGTGGACT AACATTGTAT TATTTTCTCA AATCAAGAAA AAACATTTAA 

 

Protein sequence

MSAENPDDVL TEKIKILATD DEKIKSFGEL FTNDSSREIL QLLFNEEMTA NQIAQKTDIS 
LQLVKYHLNK LQDLGVVKIS KVEKNSKSQD MKVYSATKFS IVIVPPKLSE KTKESKLLVR 
SFRHIYKVAG LAIATGISGM FSLSQIQNKP IPVQSARQFA AVKEPSMRME SFDESAESFV 
TSAPNLNTES EDLSAGMEIT EKAIDSGVSG IDLSIPFVII TIILGGLTLY YFLKSRKNI