Gene Nmar_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0452 
Symbol 
ID5773058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp400165 
End bp400557 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content33% 
IMG OID641316083 
Productresponse regulator receiver protein 
Protein accessionYP_001581786 
Protein GI161527960 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000249276 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGATT CCACAAAGAG AATAACAGGA ATTGTTGTTG ATGATGAGCC TGACATAGTA 
GATGTATTTA GTGAAATGCT AGAAGACAGA GGCATCGAGG TAATTGGAAA AGGAGGCAAT
GGGAAAGAAG CAATTGATCT TTATTTTGCA AACAATCCAG ATATTGTATT TGTAGATATG
ATGATGCCAG ATGGTTCAGG ATTCTATGCA ATTAAAAAAA TTCGTGCAAA AGATTCCAAA
GCTGTAATAA TTGCAGTAAC TGCAGATGTC ACATCATTAA CTGAAGAAAA ACTCAAGAAA
CTAAAAGTAA ATGGTATTGT TTACAAACCA ATAGACATGG ACAATCTAAT GGAAATTGTA
AAAATATCTC AGATTTCCAA GATTAGTAAA TAA
 
Protein sequence
MSDSTKRITG IVVDDEPDIV DVFSEMLEDR GIEVIGKGGN GKEAIDLYFA NNPDIVFVDM 
MMPDGSGFYA IKKIRAKDSK AVIIAVTADV TSLTEEKLKK LKVNGIVYKP IDMDNLMEIV
KISQISKISK