Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0452 |
Symbol | |
ID | 5773058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 400165 |
End bp | 400557 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641316083 |
Product | response regulator receiver protein |
Protein accession | YP_001581786 |
Protein GI | 161527960 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000000249276 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGATT CCACAAAGAG AATAACAGGA ATTGTTGTTG ATGATGAGCC TGACATAGTA GATGTATTTA GTGAAATGCT AGAAGACAGA GGCATCGAGG TAATTGGAAA AGGAGGCAAT GGGAAAGAAG CAATTGATCT TTATTTTGCA AACAATCCAG ATATTGTATT TGTAGATATG ATGATGCCAG ATGGTTCAGG ATTCTATGCA ATTAAAAAAA TTCGTGCAAA AGATTCCAAA GCTGTAATAA TTGCAGTAAC TGCAGATGTC ACATCATTAA CTGAAGAAAA ACTCAAGAAA CTAAAAGTAA ATGGTATTGT TTACAAACCA ATAGACATGG ACAATCTAAT GGAAATTGTA AAAATATCTC AGATTTCCAA GATTAGTAAA TAA
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Protein sequence | MSDSTKRITG IVVDDEPDIV DVFSEMLEDR GIEVIGKGGN GKEAIDLYFA NNPDIVFVDM MMPDGSGFYA IKKIRAKDSK AVIIAVTADV TSLTEEKLKK LKVNGIVYKP IDMDNLMEIV KISQISKISK
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