| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0433 |
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| Symbol | |
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| ID | 5774616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 385645 |
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| End bp | 386463 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641316063 |
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| Product | exosome complex RNA-binding protein Rrp42 |
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| Protein accession | YP_001581767 |
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| Protein GI | 161527941 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2123] RNase PH-related exoribonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00701931 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACATCAC ATACAGTTAT TGACGAACTA AAGAGAAACC AAATTCTTGA ATTATTAGAA
CAAGGAAAAA GAGTAGATGG TAGAGCTCTT GATGAATCAA GAGAAGTTTC TATTGAAACT
AATGCCATTC CAAAAGCAAA CGGTTCTGCA AGAGTTCGAT TAGGCGATAC TGAAGTTGTA
TGTGGCGTTA AAATCCAACC AGACAGACCT TTTCCAGACA CTGGTGACAA AGGACTTTTC
ATTTGTACTG CTGAACTATT ACCACTTTCA CATCCTACAG TTGAAACAGG ACCTCCGGGA
CCTGAAGTAA TTGAACTAGC TAGAGTTGTT GATAGAGGAA TCAGAGAAAG TCACATGATT
GATGTATCTC AATTAGTTAT TGAAAAAGAC AAATCTGTAA TTGGTGTCTT TGCAGACAAT
GTTGTTGTTG ATTATGATGG TAATCTATTT GATGCATGTT CTTATGCTGC AACTGCCGCA
TTACTCTCAT CAAAAAGTCC TAAATGGAAT TGGGTAGACG ACGCACCTGC ACTAGTTGAA
GGTGAAGAAG TTGATGTTCC AATCACTACA ATTCCTGTAT CTGTAACCAT GGGAAAGATT
GGAAATCACA TCATAGTTGA TCCTAATGGT GATGAATGGG CAAGTATGGA TGCAAGAATT
ACAATTACTA GTGATTCTGA TGGAAACATC TGTGCCTTAC AAAAAGGTGG AGATGATGGG
TTCACACAAG ATGAAATCGT TCAATGCGGT GAAATCTCAG TCAGAGTAGG CGCAAAAATA
AGAGAAAAAT TAAAAGCAGC TCAGCAAGGA GGTCAGTAA
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| Protein sequence | MTSHTVIDEL KRNQILELLE QGKRVDGRAL DESREVSIET NAIPKANGSA RVRLGDTEVV
CGVKIQPDRP FPDTGDKGLF ICTAELLPLS HPTVETGPPG PEVIELARVV DRGIRESHMI
DVSQLVIEKD KSVIGVFADN VVVDYDGNLF DACSYAATAA LLSSKSPKWN WVDDAPALVE
GEEVDVPITT IPVSVTMGKI GNHIIVDPNG DEWASMDARI TITSDSDGNI CALQKGGDDG
FTQDEIVQCG EISVRVGAKI REKLKAAQQG GQ
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