| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0432 |
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| Symbol | |
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| ID | 5773235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 384908 |
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| End bp | 385642 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641316062 |
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| Product | exosome complex exonuclease 1 |
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| Protein accession | YP_001581766 |
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| Protein GI | 161527940 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR02065] archaeal exosome-like complex exonuclease 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0114185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTGGAC GAGAAGCAAC AATGGTCCTT ATGGACGAAA ATGGAAAACG TTGTGACGGA
CGTACAGTTG ATGAACCACG TCGAATTATG ATTAAAGCTG GTGGACTCAA AAATGCAGAT
GGTTCATCTT ACATTGAATT TGGTGATAAC AAAATTCTAG TTGGAGTATT TGGTCCTAGA
GATGTTCATC CAAAACACAT GTCTGATACT GACACTGGTA TTTTGAGAGT TAGATATCAC
ATGGAACCAT TCTCTGTTGG TGAGAGAAAG AATCCTGCAC CTTCAAGAAG AGAGATTGAA
ATTTCCAAAG TAATCAAAGA AGCATTAGAG CCTGCAGTCA TGTTAGAAAA ATTCCCAAGA
ACTGCAGTTG ATGTATTTAT CGAAGTTTTA CAAGCAGACG GTGGAACTAG ATGTGCCGCA
CTTACAGCAG CATCTGTCGC ACTAGCTGAT GCTGGAATTC CAATGAGAGA TATGGTTGCA
GCAATTGCTG CAGGCAAAGT TGCAGATACT GTGATTCTTG ATGTTAACAA TGAAGAAGAC
CAAGCAGGTC AAGCAGACAT GCCAATTGGT TACATGCCAA ATCTTGAAAA AATTACACTA
TTGCAATTAG ATGGCGTTCT TACTCCTGAA GAATACAAAA AATGTATTCA AGTTGGAGTT
GATGGATGCA AACTAGTTTA TGAATTACAA AAGAAAGCAC TCAACGACAA ATACTTTGGA
AACAAGGGAG ATTAG
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| Protein sequence | MGGREATMVL MDENGKRCDG RTVDEPRRIM IKAGGLKNAD GSSYIEFGDN KILVGVFGPR
DVHPKHMSDT DTGILRVRYH MEPFSVGERK NPAPSRREIE ISKVIKEALE PAVMLEKFPR
TAVDVFIEVL QADGGTRCAA LTAASVALAD AGIPMRDMVA AIAAGKVADT VILDVNNEED
QAGQADMPIG YMPNLEKITL LQLDGVLTPE EYKKCIQVGV DGCKLVYELQ KKALNDKYFG
NKGD
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