Gene Nmar_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0425 
Symbol 
ID5773868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp381045 
End bp381494 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content38% 
IMG OID641316055 
Product30S ribosomal protein S9 
Protein accessionYP_001581759 
Protein GI161527933 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0289267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAC CAAAAACTGA AATCTATTTT GCAACTAGAA AGACATCTAG TGCACATGTT 
TACATTACTA AAGGACAAGG TAAAGTTAGA ATTAACAACG TACCAGTTGA AATGATTCCT
CAAGAAACTG CTCGTGAAGT AATTTTAGCA CCACTTGAAA TCACTGGGGA TTTGAGAGAC
AAAATTGACA TCTCTGTTAG AGTAAGAGGA GGAGGTTTCA TGGGACAAGC AAGTGCTGTT
GCAACTGCAA TCTCTAGAGC ACTAACAGGA TGGACCAAAT CAAAGAAAGA TCCAAAAGAT
CATCCATTCC CAAAATCAAC CAGAGAAGAC CTTAGAAAAA GAATCACAGA TTATGACAAA
TATCTAATCA GCGGTGACGC CAGAAGAAAA GAACCAAAGA AGTTTGGTGG ACCTGGTGCA
AGAAGAAGAA AGCAAAAATC ATATCGTTAG
 
Protein sequence
MTTPKTEIYF ATRKTSSAHV YITKGQGKVR INNVPVEMIP QETAREVILA PLEITGDLRD 
KIDISVRVRG GGFMGQASAV ATAISRALTG WTKSKKDPKD HPFPKSTRED LRKRITDYDK
YLISGDARRK EPKKFGGPGA RRRKQKSYR