| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0408 |
|---|
| Symbol | |
|---|
| ID | 5773450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 366847 |
|---|
| End bp | 367329 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641316038 |
|---|
| Product | secreted protein |
|---|
| Protein accession | YP_001581742 |
|---|
| Protein GI | 161527916 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.121912 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAT ACCTGATACC GATTATTGCA ATTGCAATAG TTGGTTCTGT ATCAGCATTT
GCAATATCTC CATACTTTAC AGAATCTAGT ATTGATGAGG CATTACCTAC TGGTGCAGTT
GTTCAACCTA TGATGGAAGA AACCATGATG GAGAAAATGA CTCCTGTTTC TTATTCAGGA
ACTTTTATCG GTGTTGGTGA TGGAATTCAT GACGCCCAAG GTGATGCATA TACTATTCCA
CTTGAGGATG GTAGTGATGT CTTGCGATTA GAAAATTTCC AATCAACTAA TGGCCCTGAC
TTGTATGTCT ATTTGGCAAC TGATGATGAT GCTTCTGAAT TTATCAATCT AGGTGAACTC
AAAGCAAACA AGGGAAATCA AAATTACGAA ATCCCAGATG ATGCTGATTT GACCAAATAC
AACAAGGTGT TGATTTGGTG TCAAGCATTT AGCGTATTGT TTGGTAGTGC TGAACTATCA
TAA
|
|---|
| Protein sequence | MNKYLIPIIA IAIVGSVSAF AISPYFTESS IDEALPTGAV VQPMMEETMM EKMTPVSYSG
TFIGVGDGIH DAQGDAYTIP LEDGSDVLRL ENFQSTNGPD LYVYLATDDD ASEFINLGEL
KANKGNQNYE IPDDADLTKY NKVLIWCQAF SVLFGSAELS
|
|---|
| |