| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0395 |
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| Symbol | |
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| ID | 5773877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 356654 |
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| End bp | 357091 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641316024 |
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| Product | prefoldin subunit alpha |
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| Protein accession | YP_001581729 |
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| Protein GI | 161527903 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1730] Predicted prefoldin, molecular chaperone implicated in de novo protein folding |
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| TIGRFAM ID | [TIGR00293] prefoldin, archaeal alpha subunit/eukaryotic subunit 5 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0549936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCAAG AACAAGCAGA ACAATTAATG CAACAAATGC AGATGCTTGA AACATATTTT
GCAGACTTAT CTCAAAGAGA AAATACATTT CTTGGTGTAT TTAGAGAAGC AACTGCAGCT
ATTGAATCCA TAAAATCTCT TAGTAAAAAC CCTGAATCCG ACACTCTTGT TCCAATTGGA
CTTGGAACAT ATGTCCCAAC AAAAATTTCA TCCGATAGCA AAATAATTTT AAACATTGGC
GCAGGAGTGG CAGTAGAAAA AGACTTTCCT TCTGCAATTA ATTATCTTGA AGAGAGAATC
AAAGAAATTG AAATCGCAAT ACAAGATACT GCAGCAAAAA AACAAGATGC TGCTCAAAGA
TTGGAGCAAG GCAAAGCACA AGTCAACCAA CTGATGCAAG CCATGCAACA ATCTGGTCAA
CCTCCAAAAT CGGGATAA
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| Protein sequence | MSQEQAEQLM QQMQMLETYF ADLSQRENTF LGVFREATAA IESIKSLSKN PESDTLVPIG
LGTYVPTKIS SDSKIILNIG AGVAVEKDFP SAINYLEERI KEIEIAIQDT AAKKQDAAQR
LEQGKAQVNQ LMQAMQQSGQ PPKSG
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