Gene Nmar_0385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0385 
Symbol 
ID5774317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp348548 
End bp349027 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content39% 
IMG OID641316014 
Product50S ribosomal protein L11 
Protein accessionYP_001581719 
Protein GI161527893 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGAAC AAAAAATTTC ATCACTTGTA ACAGGAGGAG GAGCATCTGC AGGTCCACCT 
TTAGGTCCAG CACTAGGTCC ACTTGGCGTT AACATCATGG AAGTCATTAA TGCAATTAAT
GATAAAACAA AAGACTTTGA GGGAATGAAA GTCCCAGTCA CCGTTATTGT AGATAGTGAT
ACAAAAAAGT ATGAGATTGA AATTGGAATC CCATCAGCAG CTGCACTCAT TATGAAAGAA
GCAGGAATCC AAAAAGGGTC TGGAGCTTCT GGAACTGAAT GGGCAGGAGA TGTAACAATG
GATGCAGTTG TTAAAGTTGC AAACACGAAA CTAGAAAATT CTTATGCATC ATCATTAAAA
TCAGTCGCAA AAACCATAGT TGGTACATGT CTTGCTTTAG GAGTCAAAGT AGAAGGAAAG
ACCCCTAAAG AAATTACAGC AGAGATCAAT GAAGGCAAGT GGGATGAGAA ATTCCAATAG
 
Protein sequence
MGEQKISSLV TGGGASAGPP LGPALGPLGV NIMEVINAIN DKTKDFEGMK VPVTVIVDSD 
TKKYEIEIGI PSAAALIMKE AGIQKGSGAS GTEWAGDVTM DAVVKVANTK LENSYASSLK
SVAKTIVGTC LALGVKVEGK TPKEITAEIN EGKWDEKFQ