| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0381 |
|---|
| Symbol | rplP0 |
|---|
| ID | 5774630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 345558 |
|---|
| End bp | 346424 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641316010 |
|---|
| Product | acidic ribosomal protein P0 |
|---|
| Protein accession | YP_001581715 |
|---|
| Protein GI | 161527889 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0244] Ribosomal protein L10 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.767428 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCATGAAA ATAGAACCTC TTATCCAAAG AGAAAAACAC AGATGTATCA GCAATTACAA
GAGCTACCAA AAAAATACAA AGTAATGGCA ATTATCAAAA TGAACAAGGT ACGTTCTACT
CAGATACTAC CTTTAAGAAA AACTCTCAAA GACGATGTAG AGTTTTTCAG TGTTAAAGAC
AAAGTTGCAC AAAAAGCATT AGAGAATTCA GACATTCCTG GAATGAAAGA CATGATTGGA
GAATTCAAAG GACAAGTAAT GATCATGTTT ACAAACATGT CACCATTCAA ACTTAACGTA
CTCTTGGCAA AGAACAAAAT CATGATGATG GCAAGAGGTG GAGATATTGC AAGTGTTGAT
GTTGTAGTTC CAGCAAAGAA CACGGGAATC GCTCCAGGAC CAATGCTTAC AGAATTCAAA
GAAGCAGGAA TCCCAACTAA GATTGATCAA GGTACAATCT GGATTGCAAA AGATTCCACA
CCAGTACTCA AAGGTGAGGC AATCAATGAG AAACTTGCAG CAATTTTAGG TAAATTAGAC
ATCAAACCGG TAGAAGCAGG AATTACATTA TTCACAGCAC TTGAAGACGG ACTCAAGTAT
GCTGAAGAAG AGATGATAAT TGATGTTGAG AAAGTAAGAG ACGAATTTGC ACAAGCACAC
CAAGAAGCAA TTTCATTATC TATTGAGGCA GCATATGTCA CACCAGAAAA CATCGAACAA
ATATTGGCAA AAGCAGCACA ATCAGCACGT TCTGTTTCTG TTGAATCAGG ATACATGACT
GATGAGACTA AAGAGCAAAT CTTGCAAAAG GCAGATGCTC AAGCAAGAGC AGTTGCAGGT
CAAGCAAAAG ATTACACCCC AGCATAA
|
|---|
| Protein sequence | MHENRTSYPK RKTQMYQQLQ ELPKKYKVMA IIKMNKVRST QILPLRKTLK DDVEFFSVKD
KVAQKALENS DIPGMKDMIG EFKGQVMIMF TNMSPFKLNV LLAKNKIMMM ARGGDIASVD
VVVPAKNTGI APGPMLTEFK EAGIPTKIDQ GTIWIAKDST PVLKGEAINE KLAAILGKLD
IKPVEAGITL FTALEDGLKY AEEEMIIDVE KVRDEFAQAH QEAISLSIEA AYVTPENIEQ
ILAKAAQSAR SVSVESGYMT DETKEQILQK ADAQARAVAG QAKDYTPA
|
|---|
| |