Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0381 |
Symbol | rplP0 |
ID | 5774630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 345558 |
End bp | 346424 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641316010 |
Product | acidic ribosomal protein P0 |
Protein accession | YP_001581715 |
Protein GI | 161527889 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.767428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCATGAAA ATAGAACCTC TTATCCAAAG AGAAAAACAC AGATGTATCA GCAATTACAA GAGCTACCAA AAAAATACAA AGTAATGGCA ATTATCAAAA TGAACAAGGT ACGTTCTACT CAGATACTAC CTTTAAGAAA AACTCTCAAA GACGATGTAG AGTTTTTCAG TGTTAAAGAC AAAGTTGCAC AAAAAGCATT AGAGAATTCA GACATTCCTG GAATGAAAGA CATGATTGGA GAATTCAAAG GACAAGTAAT GATCATGTTT ACAAACATGT CACCATTCAA ACTTAACGTA CTCTTGGCAA AGAACAAAAT CATGATGATG GCAAGAGGTG GAGATATTGC AAGTGTTGAT GTTGTAGTTC CAGCAAAGAA CACGGGAATC GCTCCAGGAC CAATGCTTAC AGAATTCAAA GAAGCAGGAA TCCCAACTAA GATTGATCAA GGTACAATCT GGATTGCAAA AGATTCCACA CCAGTACTCA AAGGTGAGGC AATCAATGAG AAACTTGCAG CAATTTTAGG TAAATTAGAC ATCAAACCGG TAGAAGCAGG AATTACATTA TTCACAGCAC TTGAAGACGG ACTCAAGTAT GCTGAAGAAG AGATGATAAT TGATGTTGAG AAAGTAAGAG ACGAATTTGC ACAAGCACAC CAAGAAGCAA TTTCATTATC TATTGAGGCA GCATATGTCA CACCAGAAAA CATCGAACAA ATATTGGCAA AAGCAGCACA ATCAGCACGT TCTGTTTCTG TTGAATCAGG ATACATGACT GATGAGACTA AAGAGCAAAT CTTGCAAAAG GCAGATGCTC AAGCAAGAGC AGTTGCAGGT CAAGCAAAAG ATTACACCCC AGCATAA
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Protein sequence | MHENRTSYPK RKTQMYQQLQ ELPKKYKVMA IIKMNKVRST QILPLRKTLK DDVEFFSVKD KVAQKALENS DIPGMKDMIG EFKGQVMIMF TNMSPFKLNV LLAKNKIMMM ARGGDIASVD VVVPAKNTGI APGPMLTEFK EAGIPTKIDQ GTIWIAKDST PVLKGEAINE KLAAILGKLD IKPVEAGITL FTALEDGLKY AEEEMIIDVE KVRDEFAQAH QEAISLSIEA AYVTPENIEQ ILAKAAQSAR SVSVESGYMT DETKEQILQK ADAQARAVAG QAKDYTPA
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