Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0336 |
Symbol | |
ID | 5773772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 298821 |
End bp | 300401 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641315964 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001581670 |
Protein GI | 161527844 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCGGCA AACGTGTTGT ACTTACTGCT GATCGTAGTT TAATGACAAA TTACAGGGGA AACTTTCTGT ATGGATTTAT TGCATGTGGA CCATATGAAG TTCTGCCAGA ATGGGTTTTT GACAAAGTGT TTTGTCCATC AGTTGAAACA GATCCAATCA CGGGGGAAGC AAAGGTTGCA CAAATTGGAT TAAGAAGAAT TGAAAGTTCA TTGATTCAAG GAGGTTACAA TAGAGAAGAT GTATTCATTG GACACCCAGA TATGTTGCAC AAATCAATTG GTCCAGATAC CAAAGTTGTA GGAATCAATG TGATGGATCC ATTGGGAATG GCACCAGTTA CCACAACAAT GTCACCAGAA AAATTGTCGT ATGTAGCAAT GAAATTTAAA AAAATGTGTG CAAGTATAAT TCAGCTCAAA AAGAAATATG ATTTCAAAGT TGTTGTTGGA GGAAACGGAG CATGGGAATT AGCAAAATCA GATAGAATGA AGATTCATGG AATAGACACA GTAGTAGTTG GAGAGGCAGA TGAATTAGCA GTTGATTTGT TCCAAGATTT GGAGAAAAAT GATGCACCAG AATTGATGCA CTGTTTTGTA AGAAACCTTG AAAATATTCC AGTTATTGAA GGTCCTACAA TCAACTCATT GATTGAAGCA ATGAGAGGTT GTGGAAGAGG TTGTGATTTT TGTGATGTAA ATAAGAGATC AAAAAAAGAT TTACCTATAG ATAGATTACA ACACGAAGCA AAAACTAATT TAGATTACGG TTTTGACTCA ATCTGGTTAC ATTCTGATGA AATGTTACTT TATGGATGTG ATAACAGAGA CTTTGTTCCA AACAGAGATG CAATTACAGA TTTGTGGAAG TCACTAAAAG GACTAGGTGC AAACTTTATT GGAACTACAC ATATGACATT TTCTGCAGTT GCTGCAGATC CTACACTAAT GCAACAAATT TCTCATGTAA ATGGACAGGA CCAATCAGGA AGATGGCTTG CAACCAATTT AGGAATTGAA ACAGTTGCAC CAGATATGGT AAAAAAACAC CTAGGTGTTA AAACAAGACC ATTCTCAACA GAAGAATGGG GCAGTGTAGT TAGAGAAGGT GCAAAAATTC TTAATGAGAA CCACTGGTTC CCAGCAGCTA CAATCATTAT TGGTTGGCCA GATGAAACAC CGGATGATAT TCAATATACA ATTGACATGA TGAGCGACTT TAGAGAAATG GACTTTAGAG GATTAGTAGC ACCATTATTG TATCAAGATT TTAGTGAAAA GAATTCAATG CACTTTGGAA ACTTGAATGA AGCTCAATTT ACACTATTTT GGAAATGCTG GGAAAACAAC CTTAGAGTAA TTAATGACAT TATTCCAATT ATTCTCAGAA ACAAGACCTA CGGTCCACCA ATGAAAGTTT TCATGTATGG AATTTTGAAG GCAGGAACTT GGGCAATTAT GAGATATCTC AGAGGATTGT GCAAGGATCT CTTTAATGGA AGAACTCCTG ATGAGATAAT TGACAAATAT GCTAGAAGTA GATCAGTATC TGCTCCTAAA ATTCAAACAA AGAAATTATA G
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Protein sequence | MSGKRVVLTA DRSLMTNYRG NFLYGFIACG PYEVLPEWVF DKVFCPSVET DPITGEAKVA QIGLRRIESS LIQGGYNRED VFIGHPDMLH KSIGPDTKVV GINVMDPLGM APVTTTMSPE KLSYVAMKFK KMCASIIQLK KKYDFKVVVG GNGAWELAKS DRMKIHGIDT VVVGEADELA VDLFQDLEKN DAPELMHCFV RNLENIPVIE GPTINSLIEA MRGCGRGCDF CDVNKRSKKD LPIDRLQHEA KTNLDYGFDS IWLHSDEMLL YGCDNRDFVP NRDAITDLWK SLKGLGANFI GTTHMTFSAV AADPTLMQQI SHVNGQDQSG RWLATNLGIE TVAPDMVKKH LGVKTRPFST EEWGSVVREG AKILNENHWF PAATIIIGWP DETPDDIQYT IDMMSDFREM DFRGLVAPLL YQDFSEKNSM HFGNLNEAQF TLFWKCWENN LRVINDIIPI ILRNKTYGPP MKVFMYGILK AGTWAIMRYL RGLCKDLFNG RTPDEIIDKY ARSRSVSAPK IQTKKL
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