Gene Nmar_0306 details

Gene Information

• Locus tag: Nmar_0306
• ID: 5773737
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: -
• Start bp: 271169
• End bp: 271930
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 641315933
• Product: hypothetical protein
• Protein accession: YP_001581640
• Protein GI: 161527814

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 29
• Fosmid unclonability p-value: 0.407855
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGAGAATTG ATGAGTATTT AGATACATTA CCAGAAAATT TACTGAACGG GGAGGATGTT 
CAACTACCAG AAAAGTCTCT AAGAAGCATT TTCAAATTTG TAAAATTGAC AAAAGATGAT 
ATTTTTTATC ATCTAGGATG TAGTGATGAA AAAGGAATAG AGATAGCAGT AAAAGAATTC 
CAAGTAGAAA AAGCAGTAGG AATAGACAAT AATTGTGAAA AAATTGAAAA TGCAAAAAAA 
AATCTTGAAG AAAAACAAAC CAAAGCTGAA TTAAGATGTC AAGATATTTT GGATTCAGAC 
ATTTCTGATG CAACAGTAAT TTTGTTTTGG TTTACAGATG AAAATATTAC AAATCAAATG 
TTAAAAAAAT TTGAAGAATT AAAATCAGAT ACAAGAATAA TTACTATTTG GGGGCCATTA 
CCAGATTGCA TTCCAGATAA AGTAGACTTT CCATACATCG TAAACAAAGT ACCATTTACA 
AAAGCAAAGA ATATGCAAGA ACAGTTGCTA GCAGTGTTTG GTGTAAAATG TGTAGATTTT 
GTTACAGCGT GGGAATTTGC AGAAAGATAC ACAAAAGCAA TTGGTTCACC TGAAATCAAA 
AACGATCGAT TTCTCACAAT TATTCAAACT CTAGTAATCT GGATCAATGC AAAAAAATTA 
GGAGTTGCTT GCGGAGAAGA GATTCCAGAG TCAATTCAGA CATACATTAA ACTCATGAAA 
ATGAATTTTG ACATAGATTT TGAACCCATG TTAAAAGAAT AA 

 

Protein sequence

MRIDEYLDTL PENLLNGEDV QLPEKSLRSI FKFVKLTKDD IFYHLGCSDE KGIEIAVKEF 
QVEKAVGIDN NCEKIENAKK NLEEKQTKAE LRCQDILDSD ISDATVILFW FTDENITNQM 
LKKFEELKSD TRIITIWGPL PDCIPDKVDF PYIVNKVPFT KAKNMQEQLL AVFGVKCVDF 
VTAWEFAERY TKAIGSPEIK NDRFLTIIQT LVIWINAKKL GVACGEEIPE SIQTYIKLMK 
MNFDIDFEPM LKE